Variant report

Variant rs542309266
Chromosome Location chr21:46806931-46806932
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46798200-46807600 Weak transcription H9 Cell Line embryonic stem cell
2 chr21:46802800-46808800 Bivalent Enhancer Fetal Muscle Trunk muscle
3 chr21:46803200-46807400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr21:46804200-46808400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr21:46804400-46808800 Enhancers Ovary ovary
6 chr21:46805400-46807600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr21:46805400-46808200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr21:46805800-46807400 Enhancers Pancreas Pancrea
9 chr21:46806000-46808600 Enhancers Fetal Heart heart
10 chr21:46806000-46808800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr21:46806200-46807400 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr21:46806200-46807400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr21:46806200-46807400 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr21:46806200-46807400 Enhancers A549 lung
15 chr21:46806200-46807800 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr21:46806200-46808200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr21:46806200-46808400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
18 chr21:46806200-46808600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr21:46806200-46808600 Bivalent Enhancer Placenta Placenta
20 chr21:46806200-46808800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr21:46806400-46807200 Flanking Active TSS Stomach Smooth Muscle stomach
22 chr21:46806400-46807200 Enhancers HMEC breast
23 chr21:46806400-46807400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr21:46806400-46807400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr21:46806400-46807400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
26 chr21:46806400-46807400 Enhancers Colon Smooth Muscle Colon
27 chr21:46806400-46807400 Enhancers Duodenum Smooth Muscle Duodenum
28 chr21:46806400-46807400 Enhancers Rectal Smooth Muscle rectum
29 chr21:46806400-46807400 Enhancers Right Ventricle heart
30 chr21:46806400-46807600 Enhancers NH-A brain
31 chr21:46806400-46807800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr21:46806400-46807800 Enhancers Esophagus oesophagus
33 chr21:46806400-46807800 Enhancers Spleen Spleen
34 chr21:46806400-46807800 Bivalent Enhancer NHEK skin
35 chr21:46806400-46808000 Enhancers HSMM muscle
36 chr21:46806400-46808400 Enhancers Fetal Lung lung
37 chr21:46806400-46808400 Bivalent Enhancer Fetal Stomach stomach
38 chr21:46806400-46808800 Enhancers Left Ventricle heart
39 chr21:46806600-46807000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr21:46806600-46807000 Enhancers Hela-S3 cervix
41 chr21:46806600-46807000 Bivalent Enhancer K562 blood
42 chr21:46806600-46807000 Flanking Active TSS NHDF-Ad bronchial
43 chr21:46806600-46807200 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr21:46806600-46807200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr21:46806600-46807200 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr21:46806600-46807200 Flanking Active TSS Adipose Nuclei Adipose
47 chr21:46806600-46807200 Flanking Active TSS Osteobl bone
48 chr21:46806600-46807400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr21:46806600-46807600 Enhancers Brain Cingulate Gyrus brain
50 chr21:46806600-46807800 Enhancers Lung lung

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