Variant report

Variant rs542488068
Chromosome Location chr21:44848800-44848801
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44847400-44852000 Enhancers Placenta Placenta
2 chr21:44847600-44849200 Enhancers Spleen Spleen
3 chr21:44847600-44850600 Enhancers HepG2 liver
4 chr21:44847600-44851200 Weak transcription Gastric stomach
5 chr21:44847800-44849400 Enhancers Fetal Heart heart
6 chr21:44847800-44849400 Flanking Active TSS Hela-S3 cervix
7 chr21:44848000-44848800 Enhancers Primary B cells from peripheral blood blood
8 chr21:44848000-44849200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr21:44848000-44849200 Enhancers Lung lung
10 chr21:44848000-44849200 Enhancers Stomach Mucosa stomach
11 chr21:44848000-44849400 Enhancers Pancreas Pancrea
12 chr21:44848000-44849600 Bivalent Enhancer Fetal Muscle Leg muscle
13 chr21:44848000-44849600 Weak transcription Dnd41 blood
14 chr21:44848000-44850200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr21:44848000-44850600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr21:44848000-44850600 Enhancers Placenta Amnion Placenta Amnion
17 chr21:44848000-44850600 Weak transcription Right Ventricle heart
18 chr21:44848000-44850600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr21:44848000-44850800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr21:44848000-44851800 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr21:44848000-44852000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr21:44848000-44861400 Weak transcription Colonic Mucosa Colon
23 chr21:44848200-44848800 Enhancers Muscle Satellite Cultured Cells --
24 chr21:44848200-44848800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr21:44848200-44849000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr21:44848200-44849200 Enhancers Fetal Brain Female brain
27 chr21:44848200-44849200 Enhancers Fetal Stomach stomach
28 chr21:44848200-44849200 Weak transcription HUVEC blood vessel
29 chr21:44848200-44849800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr21:44848200-44849800 Enhancers Adipose Nuclei Adipose
31 chr21:44848200-44850200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr21:44848200-44850200 Weak transcription Duodenum Mucosa Duodenum
33 chr21:44848200-44850200 Enhancers NHEK skin
34 chr21:44848200-44850400 Weak transcription Fetal Intestine Large intestine
35 chr21:44848200-44850600 Weak transcription Brain Germinal Matrix brain
36 chr21:44848200-44850800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr21:44848200-44851400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr21:44848200-44852000 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr21:44848200-44852000 Bivalent Enhancer Fetal Muscle Trunk muscle
40 chr21:44848200-44855800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr21:44848200-44862800 Weak transcription Right Atrium heart
42 chr21:44848400-44848800 Weak transcription GM12878-XiMat blood
43 chr21:44848400-44849000 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr21:44848400-44849200 Enhancers Ovary ovary
45 chr21:44848400-44851400 Enhancers Skeletal Muscle Male skeletal muscle
46 chr21:44848600-44848800 Flanking Active TSS Liver Liver
47 chr21:44848600-44848800 Enhancers Psoas Muscle Psoas
48 chr21:44848600-44849200 Enhancers Esophagus oesophagus
49 chr21:44848600-44849800 Weak transcription Primary B cells from cord blood blood
50 chr21:44848600-44849800 Enhancers Fetal Lung lung

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