Variant report

Variant rs542525323
Chromosome Location chr22:22840592-22840593
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22830600-22842800 Weak transcription Primary B cells from peripheral blood blood
2 chr22:22832600-22861800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr22:22833400-22854400 Weak transcription Brain Hippocampus Middle brain
4 chr22:22835200-22842600 Weak transcription Fetal Intestine Large intestine
5 chr22:22835400-22841200 Weak transcription Fetal Intestine Small intestine
6 chr22:22835400-22846000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:22835800-22842000 Weak transcription H1 Cell Line embryonic stem cell
8 chr22:22836000-22842000 Weak transcription HepG2 liver
9 chr22:22837000-22840800 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr22:22837400-22840800 Weak transcription Fetal Stomach stomach
11 chr22:22837400-22842000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr22:22837400-22856000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr22:22837600-22842200 Weak transcription Primary T cells fromperipheralblood blood
14 chr22:22837600-22843000 Weak transcription Fetal Brain Male brain
15 chr22:22837600-22861800 Weak transcription Brain Angular Gyrus brain
16 chr22:22837600-22862000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr22:22837800-22840800 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr22:22838000-22842000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr22:22838000-22842400 Weak transcription Primary T cells from cord blood blood
20 chr22:22838000-22842400 Weak transcription Brain Anterior Caudate brain
21 chr22:22838000-22847800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr22:22838000-22862000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr22:22838200-22842000 Weak transcription Primary B cells from cord blood blood
24 chr22:22838400-22856800 Weak transcription Primary hematopoietic stem cells blood
25 chr22:22838600-22840800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr22:22838600-22841000 Weak transcription Fetal Muscle Trunk muscle
27 chr22:22838600-22849600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr22:22838600-22861800 Weak transcription Brain Cingulate Gyrus brain
29 chr22:22838800-22840600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr22:22838800-22840800 Weak transcription HSMM muscle
31 chr22:22838800-22844800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr22:22839000-22841400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr22:22839000-22847800 Weak transcription A549 lung
34 chr22:22839000-22862000 Weak transcription NH-A brain
35 chr22:22839200-22840800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr22:22839200-22843800 Strong transcription Brain Germinal Matrix brain
37 chr22:22839200-22845000 Strong transcription K562 blood
38 chr22:22839400-22840600 Weak transcription Fetal Muscle Leg muscle
39 chr22:22839400-22840800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr22:22839400-22840800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr22:22839400-22843600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr22:22839400-22846000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr22:22839400-22848800 Strong transcription Fetal Brain Female brain
44 chr22:22839400-22850400 Strong transcription Dnd41 blood
45 chr22:22839400-22862200 Weak transcription Muscle Satellite Cultured Cells --
46 chr22:22839600-22842000 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr22:22839600-22842400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr22:22839600-22849800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr22:22839600-22861600 Weak transcription Fetal Thymus thymus
50 chr22:22839800-22840600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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