Variant report

Variant	rs542612879
Chromosome Location	chr1:197807474-197807475
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009697	chr1:197804294-197825037	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197806800-197809000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:197807000-197808400	Enhancers	Hela-S3	cervix
3	chr1:197807000-197808600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:197807000-197808600	Enhancers	HUVEC	blood vessel
5	chr1:197807000-197808600	Enhancers	NHDF-Ad	bronchial
6	chr1:197807200-197808000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:197807200-197808000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr1:197807200-197808200	Enhancers	HMEC	breast
9	chr1:197807200-197808400	Enhancers	A549	lung
10	chr1:197807200-197808600	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr1:197807200-197808600	Enhancers	Muscle Satellite Cultured Cells	--
12	chr1:197807200-197808600	Enhancers	Osteobl	bone
13	chr1:197807200-197808800	Enhancers	NHEK	skin
14	chr1:197807400-197808000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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