Variant report

Variant rs542680403
Chromosome Location chr22:22275803-22275804
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22257000-22277600 Weak transcription Aorta Aorta
2 chr22:22270600-22276600 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr22:22271800-22281000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr22:22272000-22279600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr22:22272000-22282400 Weak transcription Colon Smooth Muscle Colon
6 chr22:22272200-22276800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr22:22272200-22277600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr22:22272200-22279600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr22:22272200-22279600 Weak transcription Muscle Satellite Cultured Cells --
10 chr22:22272200-22279600 Weak transcription Liver Liver
11 chr22:22272200-22281400 Weak transcription Brain Angular Gyrus brain
12 chr22:22272200-22284800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr22:22272400-22276000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr22:22272400-22276800 Weak transcription Left Ventricle heart
15 chr22:22272400-22279600 Weak transcription K562 blood
16 chr22:22272400-22282800 Weak transcription HSMM muscle
17 chr22:22272400-22283200 Weak transcription Brain Substantia Nigra brain
18 chr22:22272400-22283200 Weak transcription HSMMtube muscle
19 chr22:22272600-22279800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr22:22272600-22279800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr22:22272600-22280000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr22:22272600-22283800 Weak transcription HepG2 liver
23 chr22:22272800-22283000 Weak transcription Rectal Smooth Muscle rectum
24 chr22:22273000-22280200 Weak transcription NHEK skin
25 chr22:22273000-22288400 Strong transcription Fetal Muscle Leg muscle
26 chr22:22273000-22291000 Strong transcription Fetal Stomach stomach
27 chr22:22273200-22276200 Strong transcription Stomach Smooth Muscle stomach
28 chr22:22273200-22276800 Weak transcription Fetal Intestine Large intestine
29 chr22:22273200-22283000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr22:22273200-22283000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr22:22273200-22283400 Weak transcription Thymus Thymus
32 chr22:22273200-22291000 Weak transcription Psoas Muscle Psoas
33 chr22:22273400-22276000 Weak transcription NH-A brain
34 chr22:22273400-22276200 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr22:22273400-22277400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr22:22273400-22277800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr22:22273400-22278600 Strong transcription Placenta Placenta
38 chr22:22273400-22280800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr22:22273400-22283600 Weak transcription Dnd41 blood
40 chr22:22273400-22284600 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr22:22273400-22289400 Strong transcription Primary neutrophils fromperipheralblood blood
42 chr22:22273400-22289400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr22:22273400-22289600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr22:22273400-22289600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr22:22273400-22290200 Strong transcription Adipose Nuclei Adipose
46 chr22:22273600-22279600 Weak transcription Duodenum Mucosa Duodenum
47 chr22:22273600-22280800 Weak transcription Colonic Mucosa Colon
48 chr22:22273600-22281200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr22:22273600-22281200 Weak transcription Primary B cells from peripheral blood blood
50 chr22:22273600-22282800 Weak transcription Primary T helper cells fromperipheralblood blood

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