Variant report

Variant	rs542784128
Chromosome Location	chr11:59483836-59483837
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:6)
CpG islands
(count:0)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:6 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TEAD4	chr11:59483525-59483887	K562	blood:	n/a	n/a
2	TEAD4	chr11:59483473-59483945	K562	blood:	n/a	n/a
3	ZMIZ1	chr11:59483595-59483844	K562	blood:	n/a	n/a
4	CEBPD	chr11:59483600-59483863	K562	blood:	n/a	n/a
5	CUX1	chr11:59483609-59483840	K562	blood:	n/a	n/a
6	TAL1	chr11:59483536-59483862	K562	blood:	n/a	n/a

No data

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:59479738..59481796-chr11:59482319..59484828,2	K562	blood:
2	chr11:59436021..59438206-chr11:59481506..59484047,3	K562	blood:
3	chr11:59483722..59486597-chr11:59487703..59490469,2	K562	blood:
4	chr11:59479738..59482245-chr11:59482319..59485600,3	K562	blood:

No data

No data

No data

Variant related genes	Relation type
OR10V1	TF binding region
ENSG00000172289	Chromatin interaction
ENSG00000255355	Chromatin interaction
ENSG00000166889	Chromatin interaction
ENSG00000166900	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413838	chr11:59483281-59483865	Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59478200-59489600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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