Variant report

Variant	rs542899327
Chromosome Location	chr10:23726675-23726676
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825305	chr10:23698620-23740919	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv975033	chr10:23726218-23738848	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23721400-23727400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr10:23721800-23727200	Weak transcription	HMEC	breast
3	chr10:23721800-23727400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:23721800-23727400	Weak transcription	NHEK	skin
5	chr10:23722000-23727200	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr10:23722000-23727200	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr10:23722200-23727000	Weak transcription	Hela-S3	cervix
8	chr10:23723200-23727000	Weak transcription	Primary B cells from peripheral blood	blood
9	chr10:23723400-23726800	Weak transcription	Primary B cells from cord blood	blood
10	chr10:23724400-23727000	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr10:23724800-23727200	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr10:23725200-23727200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr10:23725600-23727400	Enhancers	Stomach Mucosa	stomach
14	chr10:23726200-23727200	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr10:23726400-23727400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr10:23726600-23727000	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr10:23726600-23727400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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