Variant report
| Variant | rs542937494 |
|---|---|
| Chromosome Location | chr3:135222464-135222465 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:135210600-135222600 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr3:135221400-135223400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr3:135221800-135223000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr3:135222000-135222600 | Bivalent Enhancer | Cortex derived primary cultured neurospheres | brain |
| 5 | chr3:135222000-135222800 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr3:135222000-135222800 | Flanking Active TSS | Fetal Brain Male | brain |
| 7 | chr3:135222000-135222800 | Flanking Active TSS | Fetal Brain Female | brain |
| 8 | chr3:135222000-135223000 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 9 | chr3:135222200-135222800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 10 | chr3:135222200-135222800 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr3:135222200-135222800 | Enhancers | Primary B cells from peripheral blood | blood |
| 12 | chr3:135222200-135222800 | Enhancers | GM12878-XiMat | blood |
| 13 | chr3:135222200-135223200 | Active TSS | Brain Cingulate Gyrus | brain |
| 14 | chr3:135222400-135222600 | Flanking Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 15 | chr3:135222400-135222600 | Bivalent/Poised TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 16 | chr3:135222400-135222600 | Active TSS | Brain Anterior Caudate | brain |
| 17 | chr3:135222400-135222600 | Active TSS | Brain Substantia Nigra | brain |
| 18 | chr3:135222400-135222600 | Bivalent Enhancer | Hela-S3 | cervix |
| 19 | chr3:135222400-135222800 | Flanking Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr3:135222400-135222800 | Flanking Active TSS | H1 Cell Line | embryonic stem cell |
| 21 | chr3:135222400-135222800 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
| 22 | chr3:135222400-135222800 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 23 | chr3:135222400-135222800 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr3:135222400-135222800 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 25 | chr3:135222400-135222800 | Active TSS | Brain Angular Gyrus | brain |
| 26 | chr3:135222400-135222800 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 27 | chr3:135222400-135222800 | Bivalent Enhancer | Stomach Smooth Muscle | stomach |
| 28 | chr3:135222400-135223000 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 29 | chr3:135222400-135223000 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 30 | chr3:135222400-135223400 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
