Variant report

Variant rs542967102
Chromosome Location chr21:44851688-44851689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44847400-44852000 Enhancers Placenta Placenta
2 chr21:44848000-44851800 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr21:44848000-44852000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr21:44848000-44861400 Weak transcription Colonic Mucosa Colon
5 chr21:44848200-44852000 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr21:44848200-44852000 Bivalent Enhancer Fetal Muscle Trunk muscle
7 chr21:44848200-44855800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr21:44848200-44862800 Weak transcription Right Atrium heart
9 chr21:44848600-44852000 Enhancers A549 lung
10 chr21:44848600-44853200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr21:44848600-44856000 Weak transcription Fetal Intestine Small intestine
12 chr21:44849200-44852400 Weak transcription Ovary ovary
13 chr21:44849400-44852000 Weak transcription HUVEC blood vessel
14 chr21:44849800-44852200 Enhancers Pancreas Pancrea
15 chr21:44850200-44852000 Enhancers Stomach Mucosa stomach
16 chr21:44850400-44852000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr21:44850600-44852000 Enhancers Brain Germinal Matrix brain
18 chr21:44850600-44855600 Weak transcription Placenta Amnion Placenta Amnion
19 chr21:44850800-44851800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr21:44850800-44855800 Weak transcription Lung lung
21 chr21:44851000-44859800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr21:44851200-44851800 Enhancers Gastric stomach
23 chr21:44851200-44852000 Enhancers Fetal Lung lung
24 chr21:44851400-44852000 Enhancers Dnd41 blood
25 chr21:44851400-44852600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr21:44851400-44853200 Enhancers GM12878-XiMat blood
27 chr21:44851400-44856000 Weak transcription Esophagus oesophagus
28 chr21:44851400-44858800 Weak transcription HSMMtube muscle
29 chr21:44851400-44860800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr21:44851600-44851800 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
31 chr21:44851600-44851800 Enhancers Fetal Brain Female brain
32 chr21:44851600-44852000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
33 chr21:44851600-44852000 Active TSS Spleen Spleen
34 chr21:44851600-44853200 Weak transcription Hela-S3 cervix
35 chr21:44851600-44853600 Weak transcription Primary B cells from peripheral blood blood
36 chr21:44851600-44857600 Weak transcription HepG2 liver

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