Variant report

Variant rs542991662
Chromosome Location chr5:92499115-92499116
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:92496400-92500800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:92496400-92500800 Enhancers HMEC breast
3 chr5:92496600-92499400 Enhancers Fetal Lung lung
4 chr5:92496600-92500600 Enhancers Placenta Amnion Placenta Amnion
5 chr5:92496600-92500800 Enhancers NHLF lung
6 chr5:92497000-92499400 Enhancers Adipose Nuclei Adipose
7 chr5:92497200-92499200 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr5:92497200-92499400 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr5:92497400-92499400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr5:92497600-92499400 Enhancers Cortex derived primary cultured neurospheres brain
11 chr5:92497600-92499400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr5:92497600-92499400 Enhancers Fetal Kidney kidney
13 chr5:92497600-92499600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr5:92497800-92499200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:92497800-92499400 Enhancers Hela-S3 cervix
16 chr5:92498000-92499400 Flanking Active TSS HUVEC blood vessel
17 chr5:92498400-92499400 Enhancers HSMMtube muscle
18 chr5:92498400-92500400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:92498400-92500400 Weak transcription Rectal Smooth Muscle rectum
20 chr5:92498600-92499400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:92498600-92499400 Enhancers HSMM muscle
22 chr5:92498600-92499600 Enhancers Osteobl bone
23 chr5:92498600-92500400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:92498600-92500400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:92498600-92500600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr5:92498600-92500600 Enhancers NHDF-Ad bronchial
27 chr5:92498600-92501400 Enhancers Muscle Satellite Cultured Cells --
28 chr5:92498800-92499200 Flanking Active TSS A549 lung
29 chr5:92498800-92500400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr5:92498800-92500800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:92499000-92499200 Enhancers Colon Smooth Muscle Colon
32 chr5:92499000-92500200 Weak transcription Brain Cingulate Gyrus brain
33 chr5:92499000-92500200 Weak transcription Stomach Smooth Muscle stomach
34 chr5:92499000-92500800 Enhancers NH-A brain
35 chr5:92499000-92501600 Enhancers NHEK skin

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