Variant report
| Variant | rs543038449 |
|---|---|
| Chromosome Location | chr3:49675038-49675039 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:49655600-49676200 | Weak transcription | HepG2 | liver |
| 2 | chr3:49657600-49685400 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr3:49660800-49682600 | Weak transcription | Liver | Liver |
| 4 | chr3:49661600-49692400 | Weak transcription | Ovary | ovary |
| 5 | chr3:49661800-49682200 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr3:49662800-49685000 | Weak transcription | Right Ventricle | heart |
| 7 | chr3:49663800-49679600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 8 | chr3:49664200-49683200 | Weak transcription | Pancreas | Pancrea |
| 9 | chr3:49664600-49680000 | Weak transcription | Brain Hippocampus Middle | brain |
| 10 | chr3:49667600-49679800 | Weak transcription | Brain Germinal Matrix | brain |
| 11 | chr3:49669400-49692000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 12 | chr3:49669600-49679400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr3:49669600-49679800 | Weak transcription | Fetal Brain Female | brain |
| 14 | chr3:49669600-49680000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr3:49670000-49680000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 16 | chr3:49672800-49676000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr3:49673400-49676000 | Enhancers | K562 | blood |
| 18 | chr3:49673400-49676200 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 19 | chr3:49673600-49675600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 20 | chr3:49673800-49675600 | Enhancers | Brain Angular Gyrus | brain |
| 21 | chr3:49673800-49676400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 22 | chr3:49673800-49676600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 23 | chr3:49673800-49676600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 24 | chr3:49673800-49676800 | Enhancers | NHEK | skin |
| 25 | chr3:49673800-49692400 | Weak transcription | Gastric | stomach |
| 26 | chr3:49674000-49675400 | Enhancers | Brain Anterior Caudate | brain |
| 27 | chr3:49674000-49676000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 28 | chr3:49674000-49676000 | Enhancers | Spleen | Spleen |
| 29 | chr3:49674000-49676200 | Enhancers | Hela-S3 | cervix |
| 30 | chr3:49674000-49676600 | Enhancers | HMEC | breast |
| 31 | chr3:49674200-49676400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 32 | chr3:49674400-49676400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 33 | chr3:49674400-49676400 | Enhancers | Fetal Muscle Trunk | muscle |
| 34 | chr3:49674400-49676400 | Enhancers | HSMMtube | muscle |
| 35 | chr3:49674400-49680000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 36 | chr3:49674600-49677600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 37 | chr3:49675000-49676400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 38 | chr3:49675000-49676400 | Enhancers | Placenta | Placenta |
| 39 | chr3:49675000-49679400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr3:49675000-49680400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
