Variant report

Variant	rs543134162
Chromosome Location	chr10:119167494-119167495
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7565	chr10:119167461-119212529	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119160000-119172400	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr10:119164400-119170200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:119164600-119170200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:119164800-119167800	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr10:119164800-119173400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr10:119165000-119167600	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr10:119165200-119167600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr10:119165200-119170400	Weak transcription	Duodenum Mucosa	Duodenum
9	chr10:119165800-119170200	Weak transcription	Liver	Liver
10	chr10:119166200-119167800	Enhancers	K562	blood
11	chr10:119166200-119173800	Enhancers	Primary hematopoietic stem cells	blood
12	chr10:119166600-119169600	Weak transcription	HepG2	liver
13	chr10:119167200-119167600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links