Variant report

Variant	rs543169693
Chromosome Location	chr12:117085419-117085420
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv560321	chr12:117083560-117087901	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv560322	chr12:117083560-117088109	Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1816116	chr12:117084285-117088109	Bivalent Enhancer Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv560323	chr12:117084285-117088109	Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117078000-117085800	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr12:117078400-117085600	Weak transcription	Thymus	Thymus
3	chr12:117080600-117088000	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr12:117080600-117088000	Weak transcription	Adipose Nuclei	Adipose
5	chr12:117082400-117086200	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr12:117083200-117088200	Weak transcription	Right Atrium	heart
7	chr12:117084000-117088000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr12:117084000-117088400	Weak transcription	Lung	lung
9	chr12:117084000-117093200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr12:117084200-117088000	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr12:117084400-117086800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr12:117084600-117086000	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr12:117084600-117086200	Weak transcription	Pancreas	Pancrea
14	chr12:117084600-117088200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr12:117084800-117086000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr12:117085000-117085800	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr12:117085200-117087400	Enhancers	Fetal Thymus	thymus
18	chr12:117085400-117086000	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr12:117085400-117086600	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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