Variant report

Variant	rs543196660
Chromosome Location	chr14:24355107-24355108
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
2	nsv901494	chr14:24243637-24386159	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv976810	chr14:24355098-24391885	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24351800-24355200	Enhancers	Fetal Brain Male	brain
2	chr14:24352000-24355200	Enhancers	Fetal Intestine Small	intestine
3	chr14:24353200-24355200	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr14:24353600-24355200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr14:24353600-24355400	Enhancers	Brain Germinal Matrix	brain
6	chr14:24354400-24355200	Enhancers	Fetal Brain Female	brain
7	chr14:24355000-24355200	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr14:24355000-24355200	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr14:24355000-24355200	Enhancers	Brain Angular Gyrus	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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