Variant report

Variant	rs543278835
Chromosome Location	chr6:15736718-15736719
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:15691679..15692211-chr6:15736266..15736989,2	K562	blood:
2	chr6:15733339..15738209-chr6:16127623..16132643,9	K562	blood:
3	chr6:15733392..15737807-chr6:16127623..16131334,6	K562	blood:
4	chr6:15736277..15738090-chr6:15744197..15746726,2	K562	blood:
5	chr6:15727790..15730046-chr6:15735251..15736954,2	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428136	chr6:15595640-15781241	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv3361903	chr6:15736223-15739621	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15733400-15737600	Enhancers	Fetal Heart	heart
2	chr6:15733800-15736800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr6:15733800-15736800	Enhancers	Fetal Thymus	thymus
4	chr6:15733800-15736800	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr6:15734800-15737600	Enhancers	Fetal Intestine Small	intestine
6	chr6:15735400-15737000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr6:15735600-15736800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:15735600-15737000	Enhancers	Pancreas	Pancrea
9	chr6:15735600-15737400	Enhancers	Fetal Intestine Large	intestine
10	chr6:15735800-15736800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:15735800-15736800	Enhancers	Gastric	stomach
12	chr6:15735800-15737000	Enhancers	GM12878-XiMat	blood
13	chr6:15735800-15737000	Flanking Active TSS	K562	blood
14	chr6:15736000-15736800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr6:15736000-15736800	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr6:15736000-15736800	Enhancers	Primary T killer memory cells from peripheral blood	blood
17	chr6:15736200-15736800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr6:15736200-15736800	Enhancers	H9 Cell Line	embryonic stem cell
19	chr6:15736200-15736800	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr6:15736400-15736800	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr6:15736400-15737000	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr6:15736400-15737000	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr6:15736600-15736800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr6:15736600-15736800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr6:15736600-15736800	Enhancers	Left Ventricle	heart
26	chr6:15736600-15737000	Enhancers	H1 Cell Line	embryonic stem cell

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