Variant report

Variant rs543458668
Chromosome Location chr16:47127942-47127943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47107400-47138400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr16:47108000-47145600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr16:47108200-47130000 Weak transcription Brain Germinal Matrix brain
4 chr16:47110800-47158000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr16:47111000-47131000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr16:47112000-47132000 Weak transcription Esophagus oesophagus
7 chr16:47112000-47144800 Weak transcription Spleen Spleen
8 chr16:47113200-47142200 Weak transcription Hela-S3 cervix
9 chr16:47113400-47141000 Weak transcription NH-A brain
10 chr16:47114000-47141000 Weak transcription HSMM muscle
11 chr16:47114400-47130800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr16:47114400-47139800 Weak transcription Muscle Satellite Cultured Cells --
13 chr16:47114600-47138600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr16:47114600-47140800 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr16:47114600-47147000 Weak transcription Brain Anterior Caudate brain
16 chr16:47114800-47132000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr16:47115400-47163400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr16:47115600-47131000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr16:47115800-47130600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr16:47117600-47131000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr16:47117600-47141200 Weak transcription NHEK skin
22 chr16:47117600-47170200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr16:47118400-47165000 Weak transcription Fetal Brain Male brain
24 chr16:47118600-47139600 Weak transcription HMEC breast
25 chr16:47119400-47139800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr16:47120400-47128800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr16:47120600-47136600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr16:47120800-47137400 Weak transcription GM12878-XiMat blood
29 chr16:47123600-47136800 Weak transcription A549 lung
30 chr16:47123600-47137000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr16:47125400-47129400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr16:47125600-47131800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr16:47126000-47128000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr16:47126000-47128000 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr16:47126200-47129400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr16:47126800-47130600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr16:47127400-47130600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr16:47127400-47139400 Weak transcription K562 blood
39 chr16:47127600-47130400 Weak transcription Fetal Brain Female brain
40 chr16:47127800-47128200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr16:47127800-47128600 Weak transcription Cortex derived primary cultured neurospheres brain

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