The 2.0 version of rSNPBase

Variant report

Variant rs543483484
Chromosome Location chr3:49284528-49284529
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49266200-49292600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:49276000-49285000 Weak transcription Lung lung
3 chr3:49276400-49286200 Weak transcription NHDF-Ad bronchial
4 chr3:49276400-49293400 Weak transcription NHLF lung
5 chr3:49276400-49306400 Weak transcription Spleen Spleen
6 chr3:49276600-49286200 Weak transcription Right Ventricle heart
7 chr3:49276600-49304000 Weak transcription Stomach Smooth Muscle stomach
8 chr3:49277000-49286000 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:49277400-49292600 Weak transcription Fetal Intestine Large intestine
10 chr3:49277800-49285600 Weak transcription Placenta Placenta
11 chr3:49278400-49285800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr3:49279600-49286200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr3:49280600-49286000 Weak transcription Colon Smooth Muscle Colon
14 chr3:49281600-49285200 Strong transcription Fetal Stomach stomach
15 chr3:49282000-49285200 Strong transcription Fetal Muscle Trunk muscle
16 chr3:49282600-49286000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr3:49282600-49286000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr3:49282600-49286000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr3:49282600-49286000 Weak transcription K562 blood
20 chr3:49282600-49286200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr3:49282600-49286200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:49282600-49286200 Weak transcription GM12878-XiMat blood
23 chr3:49282600-49286400 Weak transcription Esophagus oesophagus
24 chr3:49282600-49294800 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr3:49282600-49299000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr3:49282600-49303200 Weak transcription Left Ventricle heart
27 chr3:49283000-49284600 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr3:49283000-49286000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr3:49283000-49286000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:49283200-49286000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:49283200-49286000 Weak transcription NHEK skin
32 chr3:49283200-49286200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr3:49283400-49286200 Weak transcription Ovary ovary
34 chr3:49283400-49286200 Weak transcription Hela-S3 cervix
35 chr3:49283400-49287400 Weak transcription Osteobl bone
36 chr3:49283400-49293200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr3:49283800-49285200 Weak transcription Adipose Nuclei Adipose
38 chr3:49284000-49285800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr3:49284200-49287400 Enhancers Primary monocytes fromperipheralblood blood
40 chr3:49284400-49285200 Strong transcription Fetal Muscle Leg muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015