Variant report

Variant	rs543553600
Chromosome Location	chr6:166700568-166700569
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:166698710..166701539-chr6:166750702..166753192,3	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886934	chr6:166642850-166747572	Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv3390013	chr6:166697249-166701057	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3370974	chr6:166700387-166703135	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:166687600-166704800	Weak transcription	Right Atrium	heart
2	chr6:166691200-166706000	Weak transcription	Brain Anterior Caudate	brain
3	chr6:166698400-166705800	Weak transcription	Brain Cingulate Gyrus	brain
4	chr6:166699400-166700600	Enhancers	Spleen	Spleen
5	chr6:166700000-166700800	Enhancers	Primary hematopoietic stem cells	blood
6	chr6:166700200-166700600	Enhancers	Fetal Muscle Trunk	muscle
7	chr6:166700200-166700600	Bivalent Enhancer	K562	blood
8	chr6:166700200-166700800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:166700200-166700800	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr6:166700200-166700800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr6:166700200-166700800	Flanking Active TSS	Primary B cells from peripheral blood	blood
12	chr6:166700200-166700800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr6:166700200-166701000	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr6:166700200-166701000	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr6:166700200-166701000	Flanking Active TSS	GM12878-XiMat	blood
16	chr6:166700400-166700600	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr6:166700400-166700600	Enhancers	Liver	Liver
18	chr6:166700400-166700800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
19	chr6:166700400-166700800	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr6:166700400-166700800	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr6:166700400-166700800	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr6:166700400-166700800	Flanking Active TSS	Primary B cells from cord blood	blood
23	chr6:166700400-166700800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr6:166700400-166701000	Bivalent Enhancer	HepG2	liver

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