Variant report

Variant	rs543554669
Chromosome Location	chr6:32146615-32146616
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CREB1	chr6:32144751-32146932	HepG2	liver:	n/a	n/a
2	USF1	chr6:32146478-32146771	HepG2	liver:	n/a	chr6:32146639-32146650 chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
3	CREB1	chr6:32143138-32146895	HepG2	liver:	n/a	n/a
4	POLR2A	chr6:32145680-32146651	K562	blood:	n/a	n/a
5	TBP	chr6:32144739-32146685	K562	blood:	n/a	n/a
6	E2F6	chr6:32144908-32146810	K562	blood:	n/a	chr6:32145761-32145770 chr6:32146093-32146105 chr6:32146093-32146102 chr6:32145818-32145829 chr6:32146094-32146101 chr6:32146444-32146456 chr6:32146094-32146101 chr6:32145558-32145567 chr6:32146094-32146101
7	POLR2A	chr6:32146153-32146827	GM12891	blood:	n/a	n/a
8	MYC	chr6:32144659-32147055	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
9	ATF1	chr6:32145320-32146791	K562	blood:	n/a	n/a
10	POLR2A	chr6:32144820-32146774	ECC-1	luminal epithelium:	n/a	n/a
11	USF1	chr6:32146389-32146855	ECC-1	luminal epithelium:	n/a	chr6:32146639-32146650 chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
12	TBL1XR1	chr6:32144702-32146714	K562	blood:	n/a	n/a
13	USF1	chr6:32146399-32146792	H1-hESC	embryonic stem cell:	n/a	chr6:32146639-32146650 chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
14	TEAD4	chr6:32146319-32147411	K562	blood:	n/a	n/a
15	MAX	chr6:32145238-32146940	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
16	CHD2	chr6:32144718-32146700	K562	blood:	n/a	chr6:32146668-32146678 chr6:32146447-32146457
17	POLR2A	chr6:32142951-32146868	H1-hESC	embryonic stem cell:	n/a	n/a
18	TAF1	chr6:32144696-32146750	H1-hESC	embryonic stem cell:	n/a	n/a
19	MYC	chr6:32144404-32147195	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
20	POLR2A	chr6:32142979-32146739	Raji	blood:	n/a	n/a
21	HCFC1	chr6:32144809-32146829	K562	blood:	n/a	n/a
22	WRNIP1	chr6:32146514-32146847	GM12878	blood:	n/a	n/a
23	MAX	chr6:32146344-32146856	K562	blood:	n/a	chr6:32146438-32146448
24	MXI1	chr6:32144773-32146804	Hela-S3	cervix:	n/a	chr6:32145668-32145683 chr6:32145670-32145685
25	ARID3A	chr6:32144901-32146811	HepG2	liver:	n/a	n/a
26	SIN3AK20	chr6:32145752-32146754	HepG2	liver:	n/a	n/a
27	BHLHE40	chr6:32145483-32146830	GM12878	blood:	n/a	chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
28	JUND	chr6:32143693-32146828	K562	blood:	n/a	chr6:32145560-32145569 chr6:32146443-32146452
29	POLR2A	chr6:32140323-32146931	SK-N-MC	brain:	n/a	n/a
30	E2F4	chr6:32145303-32146684	K562	blood:	n/a	chr6:32146092-32146103 chr6:32145761-32145770 chr6:32146093-32146105 chr6:32146093-32146102 chr6:32145818-32145829 chr6:32146094-32146101 chr6:32146444-32146456 chr6:32146094-32146101 chr6:32145558-32145567 chr6:32146094-32146101
31	POLR2A	chr6:32144817-32147002	K562	blood:	n/a	n/a
32	MYC	chr6:32144946-32146820	NB4	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
33	MTA3	chr6:32143070-32147309	GM12878	blood:	n/a	n/a
34	POLR2A	chr6:32142702-32146924	PBDE	blood:	n/a	n/a
35	USF2	chr6:32146455-32146840	Hela-S3	cervix:	n/a	chr6:32146640-32146649 chr6:32146638-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
36	POLR2A	chr6:32144880-32149546	GM12878	blood:	n/a	n/a
37	MXI1	chr6:32144808-32146929	HepG2	liver:	n/a	chr6:32145668-32145683 chr6:32145670-32145685
38	HEY1	chr6:32143476-32146854	HepG2	liver:	n/a	n/a
39	CEBPB	chr6:32145590-32146730	HepG2	liver:	n/a	chr6:32145804-32145812
40	ZBTB7A	chr6:32146557-32146789	K562	blood:	n/a	n/a
41	USF1	chr6:32146412-32146837	K562	blood:	n/a	chr6:32146639-32146650 chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
42	MAX	chr6:32145299-32146972	NB4	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
43	ZBTB7A	chr6:32146331-32146884	K562	blood:	n/a	n/a
44	USF1	chr6:32146413-32146871	ECC-1	luminal epithelium:	n/a	chr6:32146639-32146650 chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
45	RUNX3	chr6:32144704-32146722	GM12878	blood:	n/a	n/a
46	POLR2A	chr6:32144801-32148130	K562	blood:	n/a	n/a
47	MAZ	chr6:32143042-32146693	IMR90	lung:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
48	NR2F2	chr6:32143669-32147419	K562	blood:	n/a	chr6:32147283-32147298
49	RELA	chr6:32144885-32146635	GM15510	blood:	n/a	n/a
50	CCNT2	chr6:32145576-32146691	K562	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:32146599-32146649	AG09309	skin:	n/a
2	chr6:32146595-32146645	AG09309	skin:	n/a
3	chr6:32146595-32146645	HCT-116	colon:	n/a
4	chr6:32146599-32146649	SKMC	muscle:	n/a
5	chr6:32146595-32146645	Caco-2	colon:	n/a
6	chr6:32146599-32146649	AoSMC	blood vessel:	n/a
7	chr6:32146599-32146649	NB4	blood:	n/a
8	chr6:32146599-32146649	HEEpiC	esophagus:	n/a
9	chr6:32146595-32146645	HCPEpiC	choroid plexus:	n/a
10	chr6:32146599-32146649	SAEC	small airway:	n/a
11	chr6:32146595-32146645	BJ	skin:	n/a
12	chr6:32146599-32146649	MCF10A-Er-Src	breast:	n/a
13	chr6:32146595-32146645	HNPCEpiC	eye:	n/a
14	chr6:32146595-32146645	NT2-D1	testis:	n/a
15	chr6:32146599-32146649	BE2_C	brain:	n/a
16	chr6:32146595-32146645	AG09319	gingival:	n/a
17	chr6:32146599-32146649	HUVEC	blood vessel:	n/a
18	chr6:32146595-32146645	NH-A	brain:	n/a
19	chr6:32146595-32146645	LNCaP	prostate:	n/a
20	chr6:32146595-32146645	RPTEC	kidney:	n/a
21	chr6:32146599-32146649	H1-hESC	embryonic stem cell:	embryo
22	chr6:32146595-32146645	GM12892	blood:	n/a
23	chr6:32146599-32146649	NHDF-neo	bronchial:	n/a
24	chr6:32146599-32146649	CMK	blood:	n/a
25	chr6:32146595-32146645	PANC-1	pancreas:	n/a
26	chr6:32146595-32146645	HCM	heart:	n/a
27	chr6:32146595-32146645	PrEC	prostate:	n/a
28	chr6:32146599-32146649	HepG2	liver:	n/a
29	chr6:32146595-32146645	Jurkat	blood:	n/a
30	chr6:32146595-32146645	HAEpiC	amniotic membrane:	n/a
31	chr6:32146595-32146645	GM19239	blood:	n/a
32	chr6:32146599-32146649	AG04450	lung:	fetal
33	chr6:32146595-32146645	ECC-1	luminal epithelium:	n/a
34	chr6:32146595-32146645	H1-hESC	embryonic stem cell:	embryo
35	chr6:32146595-32146645	ovcar-3	ovarian:	n/a
36	chr6:32146599-32146649	Caco-2	colon:	n/a
37	chr6:32146599-32146649	HRE	kidney:	n/a
38	chr6:32146595-32146645	A549	lung:	n/a
39	chr6:32146595-32146645	HPAEpiC	pulmonary alveolar:	n/a
40	chr6:32146599-32146649	MCF-7	breast:	n/a
41	chr6:32146599-32146649	AG10803	skin:	n/a
42	chr6:32146595-32146645	CMK	blood:	n/a
43	chr6:32146595-32146645	AG04449	skin:	fetal
44	chr6:32146599-32146649	ECC-1	luminal epithelium:	n/a
45	chr6:32146599-32146649	GM12878	blood:	n/a
46	chr6:32146595-32146645	ProgFib	skin:	n/a
47	chr6:32146599-32146649	GM19239	blood:	n/a
48	chr6:32146595-32146645	SAEC	small airway:	n/a
49	chr6:32146599-32146649	PANC-1	pancreas:	n/a
50	chr6:32146595-32146645	MCF10A-Er-Src	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:32119236..32123483-chr6:32143856..32148114,6	MCF-7	breast:
2	chr6:32116953..32128256-chr6:32128373..32148325,54	K562	blood:
3	chr6:32096431..32099984-chr6:32142713..32147644,5	MCF-7	breast:
4	chr6:32093794..32098047-chr6:32142723..32149394,11	MCF-7	breast:
5	chr6:32117996..32123374-chr6:32143500..32146983,4	MCF-7	breast:
6	chr6:32096229..32099751-chr6:32142407..32148684,10	K562	blood:
7	chr6:32087451..32089617-chr6:32145273..32147612,2	K562	blood:
8	chr6:31939077..31941209-chr6:32144185..32146901,2	MCF-7	breast:
9	chr6:26158085..26158907-chr6:32146033..32146770,2	Hela-S3	cervix:
10	chr6:32077116..32081057-chr6:32145946..32147600,3	K562	blood:
11	chr6:32092992..32099796-chr6:32141629..32147303,15	K562	blood:
12	chr6:32142678..32147635-chr6:32160639..32166698,10	MCF-7	breast:
13	chr6:32088117..32090245-chr6:32144940..32147612,2	K562	blood:
14	chr6:32093752..32096112-chr6:32146107..32148004,2	MCF-7	breast:

Variant related genes	Relation type
AGPAT1	TF binding region
AGPAT1	CpG island
ENSG00000168477	Chromatin interaction
ENSG00000158373	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000204314	Chromatin interaction
ENSG00000258388	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000204315	Chromatin interaction
ENSG00000221988	Chromatin interaction
ENSG00000213676	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000204344	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
2	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
3	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
4	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
5	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
6	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
7	esv2758043	chr6:31871512-32209113	Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
8	esv2759415	chr6:31871512-32209113	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
9	nsv601972	chr6:31947594-32484368	Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
10	nsv601975	chr6:31949352-32484368	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
11	nsv601976	chr6:31949352-32508887	Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
12	nsv601977	chr6:31949352-32651056	Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
13	nsv601980	chr6:31950266-32484368	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
14	nsv601982	chr6:31951207-32484368	Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
15	nsv601983	chr6:31951367-32484368	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
16	nsv601984	chr6:31951912-32484368	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
17	nsv601999	chr6:31952422-32484368	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
18	nsv602000	chr6:31952422-32552416	Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
19	nsv602015	chr6:31953467-32481507	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
20	nsv602016	chr6:31953467-32484368	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
21	nsv602017	chr6:31953467-32505730	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
22	nsv602018	chr6:31953467-32509985	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
23	nsv602019	chr6:31953467-32779803	Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
24	nsv602029	chr6:31955572-32484368	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
25	nsv602035	chr6:31959480-32484368	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
26	nsv602036	chr6:31959878-32484368	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
27	nsv602052	chr6:31972034-32481507	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
28	nsv602053	chr6:31972034-32484368	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
29	nsv602054	chr6:31972034-32779803	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
30	nsv602086	chr6:31986320-32484368	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
31	nsv1024599	chr6:32007556-32481240	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
32	nsv830629	chr6:32043978-32189787	Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
33	nsv1033939	chr6:32048657-32196256	Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
34	nsv462876	chr6:32064726-32171683	Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
35	nsv602104	chr6:32064726-32171683	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
36	esv11944	chr6:32145042-32148107	Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:32142800-32147000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr6:32143000-32147000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
3	chr6:32143000-32147000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:32143000-32147000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:32143200-32146800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr6:32143200-32146800	Active TSS	iPS-15b Cell Line	embryonic stem cell
7	chr6:32143200-32147000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:32143200-32147000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:32143200-32147000	Active TSS	Ovary	ovary
10	chr6:32143200-32147200	Active TSS	ES-I3 Cell Line	embryonic stem cell
11	chr6:32143200-32147200	Active TSS	H9 Cell Line	embryonic stem cell
12	chr6:32143200-32147200	Active TSS	HUES64 Cell Line	embryonic stem cell
13	chr6:32143200-32147200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr6:32143200-32147200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
15	chr6:32143400-32146800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr6:32143600-32146800	Active TSS	Breast Myoepithelial Primary Cells	Breast
17	chr6:32144600-32147200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr6:32144800-32146800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr6:32144800-32146800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:32144800-32147000	Active TSS	Pancreatic Islets	Pancreatic Islet
21	chr6:32144800-32147200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr6:32144800-32147400	Active TSS	HUES48 Cell Line	embryonic stem cell
23	chr6:32144800-32147400	Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr6:32145000-32146800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr6:32145000-32146800	Active TSS	Thymus	Thymus
26	chr6:32145000-32147000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr6:32145000-32147000	Active TSS	Fetal Kidney	kidney
28	chr6:32145000-32147200	Active TSS	A549	lung
29	chr6:32145000-32147400	Active TSS	NHDF-Ad	bronchial
30	chr6:32145200-32146800	Active TSS	Primary T killer memory cells from peripheral blood	blood
31	chr6:32145200-32146800	Active TSS	Brain Germinal Matrix	brain
32	chr6:32145200-32146800	Active TSS	Fetal Brain Male	brain
33	chr6:32145200-32146800	Active TSS	Fetal Heart	heart
34	chr6:32145200-32146800	Active TSS	Gastric	stomach
35	chr6:32145200-32147000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr6:32145200-32147000	Active TSS	Sigmoid Colon	Sigmoid Colon
37	chr6:32145200-32147200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr6:32145200-32147200	Active TSS	Lung	lung
39	chr6:32145400-32146800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr6:32145400-32146800	Active TSS	Fetal Intestine Large	intestine
41	chr6:32145400-32146800	Active TSS	Fetal Lung	lung
42	chr6:32145400-32146800	Active TSS	Stomach Mucosa	stomach
43	chr6:32145400-32146800	Active TSS	Hela-S3	cervix
44	chr6:32145400-32146800	Active TSS	K562	blood
45	chr6:32145400-32147000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr6:32145400-32147000	Active TSS	Colonic Mucosa	Colon
47	chr6:32145400-32147200	Active TSS	Fetal Intestine Small	intestine
48	chr6:32145400-32147200	Active TSS	GM12878-XiMat	blood
49	chr6:32145400-32147400	Active TSS	iPS-18 Cell Line	embryonic stem cell
50	chr6:32145600-32146800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood

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