Variant report

Variant	rs543594985
Chromosome Location	chr2:116184205-116184206
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874919	chr2:116130709-116219686	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3460906	chr2:116183518-116184227	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases
3	esv3460908	chr2:116183518-116184227	Weak transcription Enhancers Strong transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116172400-116184600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr2:116181000-116184800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr2:116182000-116184600	Weak transcription	Fetal Intestine Large	intestine
4	chr2:116183400-116185400	ZNF genes & repeats	Fetal Intestine Small	intestine
5	chr2:116184200-116185400	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr2:116184200-116186400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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