Variant report

Variant rs543824056
Chromosome Location chr6:31786135-31786136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31783600-31789000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:31785000-31786200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr6:31785000-31786200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:31785000-31786200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:31785000-31786200 Active TSS Right Ventricle heart
6 chr6:31785000-31786600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:31785000-31786600 Active TSS Left Ventricle heart
8 chr6:31785000-31786800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr6:31785000-31787000 Active TSS Brain Substantia Nigra brain
10 chr6:31785000-31787000 Active TSS Esophagus oesophagus
11 chr6:31785000-31787000 Active TSS Pancreatic Islets Pancreatic Islet
12 chr6:31785000-31787000 Active TSS HMEC breast
13 chr6:31785000-31787800 Active TSS Breast Myoepithelial Primary Cells Breast
14 chr6:31785000-31787800 Active TSS Brain Germinal Matrix brain
15 chr6:31785200-31786200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:31785200-31786200 Active TSS iPS-15b Cell Line embryonic stem cell
17 chr6:31785200-31786200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:31785200-31786200 Active TSS Brain Inferior Temporal Lobe brain
19 chr6:31785200-31786200 Active TSS Colonic Mucosa Colon
20 chr6:31785200-31786200 Active TSS Colon Smooth Muscle Colon
21 chr6:31785200-31786200 Active TSS Duodenum Smooth Muscle Duodenum
22 chr6:31785200-31786200 Flanking Active TSS Fetal Intestine Large intestine
23 chr6:31785200-31786200 Active TSS Fetal Lung lung
24 chr6:31785200-31786200 Active TSS NHDF-Ad bronchial
25 chr6:31785200-31786200 Active TSS NHLF lung
26 chr6:31785200-31786400 Active TSS HUES48 Cell Line embryonic stem cell
27 chr6:31785200-31786400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
28 chr6:31785200-31786400 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr6:31785200-31786400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
30 chr6:31785200-31786400 Active TSS Rectal Smooth Muscle rectum
31 chr6:31785200-31786600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr6:31785200-31786600 Flanking Active TSS Primary T cells from cord blood blood
33 chr6:31785200-31786600 Flanking Active TSS Primary hematopoietic stem cells blood
34 chr6:31785200-31786600 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr6:31785200-31786600 Flanking Active TSS Fetal Muscle Leg muscle
36 chr6:31785200-31786600 Flanking Active TSS HUVEC blood vessel
37 chr6:31785200-31786800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr6:31785200-31786800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr6:31785200-31786800 Active TSS Aorta Aorta
40 chr6:31785200-31786800 Active TSS Ovary ovary
41 chr6:31785200-31787000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr6:31785200-31787000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:31785200-31787000 Flanking Active TSS Adipose Nuclei Adipose
44 chr6:31785200-31787000 ZNF genes & repeats Fetal Stomach stomach
45 chr6:31785200-31787800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr6:31785200-31788000 Transcr. at gene 5' and 3' K562 blood
47 chr6:31785400-31786200 Flanking Active TSS Primary B cells from cord blood blood
48 chr6:31785400-31786200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
49 chr6:31785400-31786200 Flanking Active TSS Fetal Brain Female brain
50 chr6:31785400-31786400 Active TSS HUES64 Cell Line embryonic stem cell

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