Variant report

Variant	rs543832112
Chromosome Location	chr10:89960622-89960623
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831940	chr10:89811247-89989199	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv895878	chr10:89959082-90006507	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89951000-89965600	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr10:89955400-89962400	Weak transcription	Left Ventricle	heart
3	chr10:89955400-89963800	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:89955400-89965000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr10:89955400-89998000	Weak transcription	Aorta	Aorta
6	chr10:89959200-89961400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr10:89959200-89961600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr10:89959600-89961800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr10:89960000-89960800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr10:89960000-89960800	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr10:89960000-89960800	Enhancers	Brain Substantia Nigra	brain
12	chr10:89960000-89961200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr10:89960000-89961400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr10:89960200-89960800	Enhancers	Brain Cingulate Gyrus	brain
15	chr10:89960200-89961000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr10:89960200-89961400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr10:89960400-89961400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr10:89960600-89961000	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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