Variant report

Variant	rs543974911
Chromosome Location	chr14:39656876-39656877
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:39651767..39657982-chr14:39696424..39701629,5	MCF-7	breast:
2	chr14:39655012..39658223-chr14:39734448..39737542,3	MCF-7	breast:
3	chr14:39655760..39659371-chr14:39734225..39738994,7	K562	blood:
4	chr14:39655751..39657346-chr14:39681052..39683372,2	K562	blood:
5	chr14:39656147..39659470-chr14:39734225..39738099,6	K562	blood:
6	chr14:39571020..39573430-chr14:39654386..39657374,3	K562	blood:
7	chr14:39655421..39657718-chr14:39690495..39693068,2	K562	blood:
8	chr14:39654966..39657537-chr14:39669625..39671853,2	K562	blood:
9	chr14:39654966..39657894-chr14:39668988..39671853,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000150527	Chromatin interaction
ENSG00000100934	Chromatin interaction
ENSG00000150526	Chromatin interaction
ENSG00000258940	Chromatin interaction
ENSG00000258651	Chromatin interaction
ENSG00000258941	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1246	chr14:39656597-39701520	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39645800-39657200	Strong transcription	HSMM	muscle
2	chr14:39647800-39658800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:39651000-39657000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:39651000-39661600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr14:39651000-39662000	Weak transcription	Pancreas	Pancrea
6	chr14:39651200-39657000	Weak transcription	Small Intestine	intestine
7	chr14:39652400-39657200	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr14:39653000-39658000	Weak transcription	Fetal Lung	lung
9	chr14:39653000-39662000	Weak transcription	Primary hematopoietic stem cells	blood
10	chr14:39653200-39661600	Weak transcription	Right Ventricle	heart
11	chr14:39653400-39657000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr14:39653400-39662000	Weak transcription	NHDF-Ad	bronchial
13	chr14:39653600-39658800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr14:39654000-39657200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:39654200-39657000	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr14:39654400-39657000	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr14:39654400-39657400	Weak transcription	Primary B cells from cord blood	blood
18	chr14:39654400-39657800	Weak transcription	Primary T helper cells PMA-I stimulated	--
19	chr14:39654400-39658400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr14:39654400-39658800	Weak transcription	Thymus	Thymus
21	chr14:39654400-39661600	Weak transcription	Left Ventricle	heart
22	chr14:39654400-39661800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr14:39654400-39661800	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr14:39654400-39672000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr14:39654600-39657000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr14:39654600-39657400	Weak transcription	Osteobl	bone
27	chr14:39654600-39657800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr14:39654600-39661600	Weak transcription	Psoas Muscle	Psoas
29	chr14:39654800-39657000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr14:39654800-39658000	Weak transcription	Fetal Brain Female	brain
31	chr14:39654800-39658200	Weak transcription	Adipose Nuclei	Adipose
32	chr14:39654800-39659400	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr14:39654800-39662000	Weak transcription	Liver	Liver
34	chr14:39655000-39657000	Weak transcription	HMEC	breast
35	chr14:39655000-39657200	Weak transcription	NH-A	brain
36	chr14:39655000-39657600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr14:39655000-39658400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr14:39655000-39658800	Weak transcription	Stomach Smooth Muscle	stomach
39	chr14:39655200-39658000	Weak transcription	Placenta	Placenta
40	chr14:39655200-39658400	Weak transcription	Fetal Muscle Leg	muscle
41	chr14:39655200-39661600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr14:39655400-39657000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr14:39655400-39657000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
44	chr14:39655400-39657800	Weak transcription	Brain Germinal Matrix	brain
45	chr14:39655400-39661600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr14:39655400-39662800	Weak transcription	Fetal Intestine Small	intestine
47	chr14:39655800-39657200	Enhancers	HepG2	liver
48	chr14:39655800-39657600	Weak transcription	Fetal Muscle Trunk	muscle
49	chr14:39655800-39657800	Weak transcription	Fetal Thymus	thymus
50	chr14:39655800-39658000	Enhancers	iPS-15b Cell Line	embryonic stem cell

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