Variant report

Variant	rs544038319
Chromosome Location	chr13:98234346-98234347
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043113	chr13:98136208-98485012	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv541884	chr13:98136208-98485012	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv900940	chr13:98225221-98281637	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv900941	chr13:98230575-98267751	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1140	chr13:98233230-98278197	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:98232600-98234800	Enhancers	Fetal Intestine Small	intestine
2	chr13:98232600-98237400	Enhancers	Fetal Intestine Large	intestine
3	chr13:98233000-98234600	Enhancers	Liver	Liver
4	chr13:98234000-98234400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr13:98234000-98235000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr13:98234200-98234400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr13:98234200-98234600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr13:98234200-98235200	Enhancers	HepG2	liver
9	chr13:98234200-98237400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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