Variant report

Variant rs544050193
Chromosome Location chr4:1237415-1237416
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1214400-1238400 Strong transcription Thymus Thymus
2 chr4:1219000-1240200 Weak transcription Hela-S3 cervix
3 chr4:1221600-1240200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr4:1222000-1240800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr4:1225000-1240200 Weak transcription K562 blood
6 chr4:1228400-1240000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr4:1228800-1238000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr4:1228800-1239400 Weak transcription Fetal Brain Male brain
9 chr4:1229200-1240400 Weak transcription Fetal Kidney kidney
10 chr4:1229600-1237800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr4:1229600-1239600 Weak transcription HSMM muscle
12 chr4:1230000-1238200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr4:1230000-1240400 Weak transcription HSMMtube muscle
14 chr4:1233400-1240600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:1234000-1238800 Weak transcription NH-A brain
16 chr4:1234200-1239400 Weak transcription Osteobl bone
17 chr4:1234600-1237800 Genic enhancers Breast Myoepithelial Primary Cells Breast
18 chr4:1234600-1240400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:1234600-1240800 Genic enhancers Spleen Spleen
20 chr4:1234800-1237600 Weak transcription NHDF-Ad bronchial
21 chr4:1234800-1238800 Weak transcription HMEC breast
22 chr4:1234800-1240000 Genic enhancers Fetal Intestine Large intestine
23 chr4:1235000-1239800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:1235000-1240800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr4:1235000-1241200 Weak transcription Aorta Aorta
26 chr4:1235200-1237600 Genic enhancers Primary T regulatory cells fromperipheralblood blood
27 chr4:1235200-1237800 Genic enhancers Fetal Intestine Small intestine
28 chr4:1235200-1238000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr4:1235200-1238000 Enhancers Skeletal Muscle Female skeletal muscle
30 chr4:1235200-1238200 Weak transcription HepG2 liver
31 chr4:1235200-1238600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:1235200-1238600 Enhancers Duodenum Mucosa Duodenum
33 chr4:1235200-1240000 Weak transcription A549 lung
34 chr4:1235200-1240000 Weak transcription HUVEC blood vessel
35 chr4:1235200-1240200 Enhancers Rectal Mucosa Donor 31 rectum
36 chr4:1235200-1240400 Enhancers Liver Liver
37 chr4:1235200-1240800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr4:1235400-1237800 Genic enhancers Lung lung
39 chr4:1235400-1239000 Weak transcription NHEK skin
40 chr4:1235400-1240200 Weak transcription H9 Cell Line embryonic stem cell
41 chr4:1235400-1240200 Enhancers Left Ventricle heart
42 chr4:1235400-1240600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr4:1235400-1240600 Genic enhancers Fetal Muscle Leg muscle
44 chr4:1235400-1240800 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr4:1235400-1241000 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr4:1235600-1238000 Enhancers Colonic Mucosa Colon
47 chr4:1235600-1238200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr4:1235600-1238600 Enhancers Sigmoid Colon Sigmoid Colon
49 chr4:1235600-1240200 Enhancers Rectal Mucosa Donor 29 rectum
50 chr4:1235600-1240200 Enhancers Right Ventricle heart

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