Variant report

Variant	rs544064545
Chromosome Location	chr1:172787353-172787354
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947450	chr1:172786009-172789082	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172785400-172788400	Weak transcription	HSMMtube	muscle
2	chr1:172786400-172789400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr1:172786600-172788000	Enhancers	Primary B cells from cord blood	blood
4	chr1:172786600-172788400	Enhancers	Primary B cells from peripheral blood	blood
5	chr1:172786800-172788000	Flanking Active TSS	GM12878-XiMat	blood
6	chr1:172786800-172788200	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr1:172786800-172789400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr1:172787000-172788200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr1:172787000-172789200	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr1:172787200-172787600	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr1:172787200-172787800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
12	chr1:172787200-172788000	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr1:172787200-172788600	Enhancers	Adipose Nuclei	Adipose

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links