Variant report

Variant	rs544108082
Chromosome Location	chr11:101444541-101444542
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv530644	chr11:101010088-101486038	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv898330	chr11:101243644-101722031	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	esv2754308	chr11:101409790-101502790	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv898331	chr11:101436689-101492630	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv1052159	chr11:101439655-101853293	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	esv3489634	chr11:101443892-101446490	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3489635	chr11:101444042-101446102	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3465431	chr11:101444478-101445566	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3489637	chr11:101444510-101445559	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3328819	chr11:101444522-101445538	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3465420	chr11:101444524-101445544	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3465442	chr11:101444524-101445544	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3465409	chr11:101444534-101445637	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3489636	chr11:101444536-101445556	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101426400-101447600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:101438400-101445400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr11:101443800-101446000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr11:101444200-101445000	Enhancers	NHLF	lung
5	chr11:101444400-101444800	Enhancers	Fetal Lung	lung
6	chr11:101444400-101449200	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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