Variant report

Variant	rs544112086
Chromosome Location	chr13:80480002-80480003
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv438256	chr13:80479404-80503110	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80476000-80484800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr13:80479000-80480200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr13:80479000-80480200	Enhancers	Brain Hippocampus Middle	brain
4	chr13:80479000-80480200	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr13:80479000-80480200	Enhancers	Brain Substantia Nigra	brain
6	chr13:80479400-80480200	Weak transcription	Fetal Brain Male	brain
7	chr13:80479600-80480400	Weak transcription	Fetal Brain Female	brain
8	chr13:80479800-80484800	Weak transcription	Brain Anterior Caudate	brain
9	chr13:80479800-80485000	Weak transcription	Brain Cingulate Gyrus	brain
10	chr13:80479800-80489000	Weak transcription	Brain Angular Gyrus	brain
11	chr13:80480000-80484200	Weak transcription	Cortex derived primary cultured neurospheres	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links