Variant report

Variant rs544283857
Chromosome Location chr3:49445599-49445600
allele -/AA
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49399000-49448000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:49413200-49447400 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:49427000-49448400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:49429000-49447200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr3:49431200-49447200 Weak transcription H1 Cell Line embryonic stem cell
6 chr3:49433800-49447200 Weak transcription Colonic Mucosa Colon
7 chr3:49435400-49445600 Weak transcription Fetal Brain Male brain
8 chr3:49435400-49447000 Weak transcription HSMMtube muscle
9 chr3:49435400-49447800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr3:49435800-49446800 Weak transcription Brain Angular Gyrus brain
11 chr3:49438200-49446800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:49439000-49447200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr3:49439600-49447200 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr3:49439800-49447000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr3:49440200-49447000 Weak transcription Fetal Lung lung
16 chr3:49441400-49447000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr3:49441400-49447000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr3:49441400-49447200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr3:49441600-49446000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:49441600-49447000 Weak transcription Fetal Brain Female brain
21 chr3:49441600-49447200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr3:49441600-49447600 Weak transcription Placenta Amnion Placenta Amnion
23 chr3:49441800-49447000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:49441800-49447200 Weak transcription Fetal Intestine Large intestine
25 chr3:49442800-49446400 Enhancers Skeletal Muscle Female skeletal muscle
26 chr3:49442800-49447000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr3:49442800-49447000 Enhancers Primary T helper cells PMA-I stimulated --
28 chr3:49442800-49447000 Enhancers Fetal Muscle Leg muscle
29 chr3:49442800-49447200 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr3:49442800-49447200 Enhancers Primary T helper cells fromperipheralblood blood
31 chr3:49442800-49447400 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr3:49443000-49445600 Enhancers Muscle Satellite Cultured Cells --
33 chr3:49443000-49445600 Enhancers Left Ventricle heart
34 chr3:49443000-49445600 Enhancers Right Atrium heart
35 chr3:49443000-49446200 Enhancers Duodenum Mucosa Duodenum
36 chr3:49443000-49446400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:49443000-49447200 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr3:49443000-49447200 Enhancers Liver Liver
39 chr3:49443200-49446000 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr3:49443200-49446000 Enhancers Stomach Mucosa stomach
41 chr3:49443200-49446400 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr3:49443200-49446600 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr3:49443200-49447000 Enhancers Primary T cells fromperipheralblood blood
44 chr3:49443200-49447600 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr3:49443400-49446000 Enhancers Skeletal Muscle Male skeletal muscle
46 chr3:49443400-49446200 Enhancers Duodenum Smooth Muscle Duodenum
47 chr3:49443400-49446600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr3:49443400-49447000 Weak transcription Brain Germinal Matrix brain
49 chr3:49443600-49446800 Weak transcription Brain Anterior Caudate brain
50 chr3:49443600-49447000 Enhancers HepG2 liver

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