Variant report

Variant	rs544324906
Chromosome Location	chr16:82077426-82077427
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:82076564..82079746-chr16:82084157..82087056,3	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv907012	chr16:81986896-82115148	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1058368	chr16:82029516-82152788	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv532598	chr16:82034475-82738733	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
4	nsv532599	chr16:82074439-82926863	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
5	esv2029415	chr16:82076824-82077509	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:82070200-82083400	Weak transcription	Colonic Mucosa	Colon
2	chr16:82070800-82081200	Weak transcription	Pancreas	Pancrea
3	chr16:82071800-82077800	Weak transcription	Stomach Mucosa	stomach
4	chr16:82072800-82077800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr16:82072800-82077800	Enhancers	Liver	Liver
6	chr16:82072800-82077800	Weak transcription	Gastric	stomach
7	chr16:82072800-82077800	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr16:82074200-82078400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr16:82074200-82085600	Enhancers	HepG2	liver
10	chr16:82074600-82078000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr16:82075200-82077800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr16:82075200-82082400	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr16:82075800-82078400	Enhancers	NHLF	lung
14	chr16:82076000-82078000	Weak transcription	Small Intestine	intestine
15	chr16:82076200-82078000	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr16:82076400-82078600	Enhancers	NH-A	brain
17	chr16:82076400-82079800	Enhancers	Fetal Lung	lung
18	chr16:82076600-82077800	Enhancers	Duodenum Mucosa	Duodenum
19	chr16:82076600-82078400	Enhancers	HSMMtube	muscle
20	chr16:82076600-82078600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr16:82076600-82079000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr16:82076600-82079600	Enhancers	Fetal Stomach	stomach
23	chr16:82076600-82094800	Enhancers	Fetal Intestine Large	intestine
24	chr16:82076800-82077800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr16:82077000-82079200	Weak transcription	Placenta	Placenta
26	chr16:82077000-82083800	Weak transcription	Lung	lung
27	chr16:82077200-82077600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr16:82077200-82077600	Weak transcription	NHDF-Ad	bronchial
29	chr16:82077200-82078600	Enhancers	Fetal Kidney	kidney
30	chr16:82077200-82079800	Enhancers	Fetal Intestine Small	intestine
31	chr16:82077400-82078000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr16:82077400-82078000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr16:82077400-82078200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr16:82077400-82078200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr16:82077400-82078200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr16:82077400-82078200	Enhancers	Osteobl	bone
37	chr16:82077400-82078400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr16:82077400-82078400	Enhancers	Muscle Satellite Cultured Cells	--
39	chr16:82077400-82078400	Enhancers	HMEC	breast
40	chr16:82077400-82078400	Enhancers	NHEK	skin

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