Variant report

Variant	rs544354793
Chromosome Location	chr12:29959659-29959660
allele	-/GATT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529328	chr12:29692414-30246209	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv898953	chr12:29905322-29989292	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv469191	chr12:29939628-30098770	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv557958	chr12:29939628-30098770	ZNF genes & repeats Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv557959	chr12:29944670-29959697	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv15301	chr12:29956430-29960234	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	nsv557963	chr12:29956687-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
8	nsv557964	chr12:29956687-29971416	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv1791821	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv1797798	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv1798426	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv1799970	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv1802535	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
14	esv1804095	chr12:29957034-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
15	nsv557969	chr12:29957068-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
16	nsv557971	chr12:29957172-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases
17	nsv557973	chr12:29957458-29959697	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:29958800-29960000	Enhancers	Muscle Satellite Cultured Cells	--
2	chr12:29959200-29959800	Enhancers	Hela-S3	cervix
3	chr12:29959600-29960000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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