Variant report

Variant	rs544446625
Chromosome Location	chr8:91014601-91014602
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91012176..91015175-chr8:91997197..91999133,2	K562	blood:
2	chr8:90995093..90997814-chr8:91010770..91014611,5	MCF-7	breast:
3	chr19:19729717..19731294-chr8:91013062..91014796,2	MCF-7	breast:
4	chr8:90993651..90998172-chr8:91012740..91014695,4	MCF-7	breast:
5	chr8:91011918..91015233-chr8:91657389..91660471,3	K562	blood:
6	chr8:91012457..91016466-chr8:91233540..91237741,4	K562	blood:
7	chr8:90996289..90998136-chr8:91010778..91015164,5	K562	blood:
8	chr8:91012528..91015432-chr8:91026705..91029174,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000104320	Chromatin interaction
ENSG00000253250	Chromatin interaction
ENSG00000104325	Chromatin interaction
ENSG00000105717	Chromatin interaction
ENSG00000180694	Chromatin interaction
ENSG00000246792	Chromatin interaction
ENSG00000253394	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933502	chr8:90702392-91049100	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
2	nsv891183	chr8:90975550-91111193	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases
3	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	nsv8365	chr8:91014360-91019600	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91012800-91014800	Active TSS	Fetal Brain Male	brain
2	chr8:91012800-91015000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:91012800-91015200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr8:91012800-91015200	Active TSS	Thymus	Thymus
5	chr8:91013000-91014800	Active TSS	H1 Cell Line	embryonic stem cell
6	chr8:91013000-91014800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr8:91013000-91014800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr8:91013000-91014800	Active TSS	HUES6 Cell Line	embryonic stem cell
9	chr8:91013000-91014800	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr8:91013000-91014800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:91013000-91014800	Active TSS	Breast Myoepithelial Primary Cells	Breast
12	chr8:91013000-91014800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr8:91013000-91014800	Active TSS	Brain Substantia Nigra	brain
14	chr8:91013000-91014800	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr8:91013000-91014800	Active TSS	Fetal Muscle Trunk	muscle
16	chr8:91013000-91014800	Active TSS	Stomach Mucosa	stomach
17	chr8:91013000-91015000	Active TSS	ES-I3 Cell Line	embryonic stem cell
18	chr8:91013000-91015000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr8:91013000-91015000	Active TSS	Primary monocytes fromperipheralblood	blood
20	chr8:91013000-91015000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr8:91013000-91015000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr8:91013000-91015000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr8:91013000-91015000	Active TSS	Brain Angular Gyrus	brain
24	chr8:91013000-91015000	Active TSS	Colon Smooth Muscle	Colon
25	chr8:91013000-91015000	Active TSS	Fetal Muscle Leg	muscle
26	chr8:91013000-91015000	Active TSS	Right Ventricle	heart
27	chr8:91013000-91015000	Active TSS	Skeletal Muscle Female	skeletal muscle
28	chr8:91013000-91015200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr8:91013000-91015200	Active TSS	Fetal Intestine Small	intestine
30	chr8:91013000-91015200	Active TSS	Stomach Smooth Muscle	stomach
31	chr8:91013200-91014800	Active TSS	H9 Cell Line	embryonic stem cell
32	chr8:91013200-91014800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr8:91013200-91014800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr8:91013200-91014800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr8:91013200-91014800	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
36	chr8:91013200-91014800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
37	chr8:91013200-91014800	Active TSS	Liver	Liver
38	chr8:91013200-91014800	Active TSS	Colonic Mucosa	Colon
39	chr8:91013200-91014800	Active TSS	Esophagus	oesophagus
40	chr8:91013200-91014800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
41	chr8:91013200-91014800	Active TSS	Fetal Lung	lung
42	chr8:91013200-91014800	Active TSS	Placenta	Placenta
43	chr8:91013200-91014800	Active TSS	Left Ventricle	heart
44	chr8:91013200-91014800	Active TSS	Lung	lung
45	chr8:91013200-91014800	Active TSS	Ovary	ovary
46	chr8:91013200-91014800	Active TSS	Pancreas	Pancrea
47	chr8:91013200-91014800	Active TSS	Placenta Amnion	Placenta Amnion
48	chr8:91013200-91014800	Active TSS	Psoas Muscle	Psoas
49	chr8:91013200-91014800	Active TSS	Sigmoid Colon	Sigmoid Colon
50	chr8:91013200-91014800	Active TSS	Skeletal Muscle Male	skeletal muscle

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