Variant report

Variant	rs544487045
Chromosome Location	chr12:116852225-116852226
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3445206	chr12:116851569-116854667	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3429017	chr12:116851669-116854667	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:116842400-116853400	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr12:116844800-116862400	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr12:116847000-116853000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:116848000-116853200	Weak transcription	Spleen	Spleen
5	chr12:116848800-116852800	Weak transcription	Fetal Brain Male	brain
6	chr12:116848800-116853200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr12:116849000-116853200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr12:116849000-116853800	Weak transcription	A549	lung
9	chr12:116849000-116854000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr12:116849000-116858200	Weak transcription	Colon Smooth Muscle	Colon
11	chr12:116849200-116854000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr12:116849200-116858000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr12:116849600-116853600	Weak transcription	Fetal Muscle Trunk	muscle
14	chr12:116849800-116854000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr12:116850000-116860600	Weak transcription	NHDF-Ad	bronchial
16	chr12:116850400-116852800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr12:116850600-116853000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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