The 2.0 version of rSNPBase

Variant report

Variant rs544494807
Chromosome Location chr3:50712995-50712996
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50711400-50714000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr3:50711400-50714400 Active TSS Brain Angular Gyrus brain
3 chr3:50711400-50714400 Active TSS Brain Inferior Temporal Lobe brain
4 chr3:50711600-50713800 Active TSS H9 Cell Line embryonic stem cell
5 chr3:50711800-50713000 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:50711800-50713000 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr3:50711800-50713000 Bivalent/Poised TSS Primary T cells from cord blood blood
8 chr3:50711800-50713000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
9 chr3:50711800-50713000 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
10 chr3:50711800-50713000 Active TSS HSMM muscle
11 chr3:50711800-50713200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr3:50711800-50713200 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr3:50711800-50713200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr3:50711800-50713200 Bivalent/Poised TSS A549 lung
15 chr3:50711800-50713400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr3:50711800-50714400 Active TSS HSMMtube muscle
17 chr3:50712000-50713000 Flanking Active TSS Primary hematopoietic stem cells blood
18 chr3:50712000-50713000 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:50712000-50713000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
20 chr3:50712000-50713000 Active TSS Aorta Aorta
21 chr3:50712000-50713000 Active TSS Colon Smooth Muscle Colon
22 chr3:50712000-50713000 Flanking Active TSS Pancreas Pancrea
23 chr3:50712000-50713200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:50712000-50713200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
25 chr3:50712000-50713200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
26 chr3:50712000-50713200 Flanking Bivalent TSS/Enh Thymus Thymus
27 chr3:50712000-50713400 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
28 chr3:50712000-50713400 Active TSS Fetal Brain Female brain
29 chr3:50712000-50713600 Active TSS HUES48 Cell Line embryonic stem cell
30 chr3:50712000-50713600 Active TSS Brain Substantia Nigra brain
31 chr3:50712000-50713600 Active TSS Pancreatic Islets Pancreatic Islet
32 chr3:50712000-50713800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr3:50712000-50714000 Active TSS ES-WA7 Cell Line embryonic stem cell
34 chr3:50712000-50714400 Active TSS Brain Anterior Caudate brain
35 chr3:50712200-50713000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr3:50712200-50713000 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr3:50712200-50713000 Bivalent/Poised TSS Primary T cells fromperipheralblood blood
38 chr3:50712200-50713000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
39 chr3:50712200-50713000 Active TSS Primary T helper naive cells fromperipheralblood blood
40 chr3:50712200-50713000 Active TSS Primary T helper cells PMA-I stimulated --
41 chr3:50712200-50713000 Active TSS Primary T helper cells fromperipheralblood blood
42 chr3:50712200-50713000 Active TSS Primary T killer naive cells fromperipheralblood blood
43 chr3:50712200-50713000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:50712200-50713000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr3:50712200-50713000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
46 chr3:50712200-50713000 Active TSS Primary mononuclear cells fromperipheralblood Blood
47 chr3:50712200-50713000 Active TSS Rectal Smooth Muscle rectum
48 chr3:50712200-50713000 Active TSS Skeletal Muscle Male skeletal muscle
49 chr3:50712200-50713000 Active TSS Skeletal Muscle Female skeletal muscle
50 chr3:50712200-50713000 Flanking Bivalent TSS/Enh HMEC breast

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Last update: Aug 31, 2015