The 2.0 version of rSNPBase

Variant report

Variant rs544712412
Chromosome Location chr12:116985190-116985191
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:116973000-116986000 Weak transcription Aorta Aorta
2 chr12:116977600-116985400 Weak transcription Placenta Placenta
3 chr12:116978000-116985800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr12:116978200-116985800 Weak transcription Psoas Muscle Psoas
5 chr12:116978200-116989400 Weak transcription Esophagus oesophagus
6 chr12:116978400-116985800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr12:116980800-116985800 Weak transcription Right Ventricle heart
8 chr12:116980800-116985800 Weak transcription NH-A brain
9 chr12:116981000-116985200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:116981000-116985400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr12:116981000-116985800 Weak transcription Fetal Kidney kidney
12 chr12:116981200-116985400 Weak transcription Fetal Thymus thymus
13 chr12:116981600-116986000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr12:116982000-116986000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr12:116982400-116985200 Weak transcription Colonic Mucosa Colon
16 chr12:116982400-116986000 Weak transcription Rectal Smooth Muscle rectum
17 chr12:116982800-116985800 Weak transcription Fetal Lung lung
18 chr12:116983200-116985600 Weak transcription Adipose Nuclei Adipose
19 chr12:116983200-116986800 Enhancers K562 blood
20 chr12:116983400-116985800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr12:116983600-116985600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr12:116983600-116985800 Weak transcription Ovary ovary
23 chr12:116983600-116986000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:116983800-116985200 Weak transcription GM12878-XiMat blood
25 chr12:116983800-116985600 Weak transcription Fetal Brain Female brain
26 chr12:116983800-116986200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr12:116984000-116985600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr12:116984200-116985200 Weak transcription Fetal Muscle Trunk muscle
29 chr12:116984200-116985400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr12:116984200-116985400 Weak transcription Colon Smooth Muscle Colon
31 chr12:116984200-116986200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr12:116984200-116996800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr12:116984200-116997000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr12:116984400-116985200 Weak transcription Primary hematopoietic stem cells blood
35 chr12:116984400-116985800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr12:116984800-116985600 Enhancers Primary neutrophils fromperipheralblood blood
37 chr12:116984800-116985800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
38 chr12:116984800-116986800 Enhancers Primary monocytes fromperipheralblood blood
39 chr12:116984800-116986800 Enhancers Fetal Muscle Leg muscle
40 chr12:116985000-116986000 Enhancers ES-WA7 Cell Line embryonic stem cell
41 chr12:116985000-116986000 Enhancers Primary B cells from cord blood blood
42 chr12:116985000-116986000 Enhancers Skeletal Muscle Male skeletal muscle
43 chr12:116985000-116986800 Enhancers Monocytes-CD14+_RO01746 blood
44 chr12:116985000-116987000 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015