Variant report

Variant	rs544739993
Chromosome Location	chr4:97563921-97563922
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879634	chr4:97371381-97727113	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv879635	chr4:97389090-97591085	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv2757944	chr4:97509566-97809092	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2759268	chr4:97509566-97809092	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv879636	chr4:97563218-97680928	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv879637	chr4:97563218-97685296	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97563000-97564000	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr4:97563400-97564200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr4:97563600-97564000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr4:97563600-97564200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:97563600-97564200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr4:97563600-97564200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr4:97563600-97564200	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr4:97563600-97564200	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr4:97563600-97564200	Enhancers	iPS-20b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links