Variant report

Variant	rs544782172
Chromosome Location	chr4:143797210-143797211
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880174	chr4:143639498-143848024	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv880175	chr4:143779613-143892252	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1033772	chr4:143788043-143800961	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv1019095	chr4:143788043-143801270	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv1021242	chr4:143788460-143801084	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv437434	chr4:143788564-143801347	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv2760829	chr4:143793939-143801096	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv2422175	chr4:143794072-143800973	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3467402	chr4:143794085-143801152	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv10580	chr4:143794158-143856359	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
11	esv3467403	chr4:143794229-143801010	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv18685	chr4:143794391-143800941	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3692841	chr4:143795347-143800361	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv516526	chr4:143796487-143800361	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143796600-143798000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr4:143797200-143797400	Enhancers	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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