Variant report

Variant	rs544857685
Chromosome Location	chr9:13788181-13788182
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv892591	chr9:13763734-13828594	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1033764	chr9:13764918-14226168	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv892592	chr9:13787648-13859052	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13779000-13791600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:13787000-13788200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr9:13787000-13788200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:13787200-13788400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr9:13787200-13788400	Enhancers	Fetal Stomach	stomach
6	chr9:13787400-13788200	Enhancers	Liver	Liver
7	chr9:13787600-13790400	Enhancers	Fetal Heart	heart
8	chr9:13787600-13791600	Weak transcription	Left Ventricle	heart
9	chr9:13787800-13788200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
10	chr9:13787800-13788400	Enhancers	Brain Germinal Matrix	brain
11	chr9:13787800-13789200	Enhancers	Fetal Muscle Leg	muscle
12	chr9:13787800-13792600	Weak transcription	Fetal Muscle Trunk	muscle
13	chr9:13788000-13788200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr9:13788000-13788200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr9:13788000-13788200	Enhancers	HSMM	muscle
16	chr9:13788000-13788400	Enhancers	Adipose Nuclei	Adipose
17	chr9:13788000-13788400	Enhancers	Brain Angular Gyrus	brain
18	chr9:13788000-13788400	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr9:13788000-13788400	Enhancers	HSMMtube	muscle
20	chr9:13788000-13788400	Enhancers	NHLF	lung
21	chr9:13788000-13788800	Enhancers	Fetal Lung	lung
22	chr9:13788000-13788800	Enhancers	Skeletal Muscle Male	skeletal muscle
23	chr9:13788000-13788800	Enhancers	NHDF-Ad	bronchial
24	chr9:13788000-13790200	Weak transcription	Psoas Muscle	Psoas

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