Variant report

Variant	rs544898520
Chromosome Location	chr14:97207699-97207700
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048302	chr14:97000845-97250538	Bivalent/Poised TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1041078	chr14:97001679-97279220	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv1050075	chr14:97004951-97279220	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
4	nsv1044202	chr14:97155291-97683983	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	nsv542179	chr14:97155291-97683983	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
6	nsv85164	chr14:97207464-97209699	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:97206200-97208800	Enhancers	Fetal Brain Male	brain
2	chr14:97206800-97208400	Bivalent/Poised TSS	HSMM	muscle
3	chr14:97207000-97207800	Flanking Active TSS	Fetal Brain Female	brain
4	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr14:97207400-97207800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
7	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
8	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
9	chr14:97207400-97207800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
10	chr14:97207400-97207800	Bivalent/Poised TSS	Primary T helper naive cells from peripheral blood	blood
11	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	Primary T killer naive cells fromperipheralblood	blood
12	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	Muscle Satellite Cultured Cells	--
14	chr14:97207400-97207800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
15	chr14:97207400-97207800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr14:97207400-97207800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr14:97207400-97207800	Flanking Active TSS	Brain Germinal Matrix	brain
18	chr14:97207400-97207800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
19	chr14:97207400-97207800	Bivalent Enhancer	Fetal Heart	heart
20	chr14:97207400-97207800	Bivalent/Poised TSS	Fetal Lung	lung
21	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	HepG2	liver
22	chr14:97207400-97207800	Flanking Bivalent TSS/Enh	NH-A	brain
23	chr14:97207400-97208000	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr14:97207400-97208000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr14:97207400-97208000	Bivalent/Poised TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr14:97207400-97208000	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
27	chr14:97207400-97208000	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
28	chr14:97207400-97208000	Bivalent/Poised TSS	Primary T helper naive cells fromperipheralblood	blood
29	chr14:97207400-97208000	Bivalent/Poised TSS	Primary T helper cells fromperipheralblood	blood
30	chr14:97207400-97208000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr14:97207400-97208000	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr14:97207400-97208000	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
33	chr14:97207400-97208000	Bivalent/Poised TSS	Hela-S3	cervix
34	chr14:97207400-97208000	Bivalent/Poised TSS	HUVEC	blood vessel
35	chr14:97207400-97208000	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
36	chr14:97207400-97208000	Bivalent/Poised TSS	NHEK	skin
37	chr14:97207400-97208000	Active TSS	NHLF	lung
38	chr14:97207400-97208200	Active TSS	iPS-20b Cell Line	embryonic stem cell
39	chr14:97207400-97208200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr14:97207400-97208200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr14:97207400-97208200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr14:97207400-97208200	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr14:97207400-97208200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr14:97207400-97208200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr14:97207400-97208200	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
46	chr14:97207400-97208200	Active TSS	Pancreatic Islets	Pancreatic Islet
47	chr14:97207400-97208200	Bivalent/Poised TSS	A549	lung
48	chr14:97207400-97208200	Bivalent/Poised TSS	Osteobl	bone
49	chr14:97207400-97208400	Active TSS	iPS-15b Cell Line	embryonic stem cell
50	chr14:97207400-97208400	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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