Variant report

Variant	rs545062262
Chromosome Location	chr8:126340559-126340560
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126339856..126342634-chr8:126343461..126345353,2	MCF-7	breast:
2	chr8:126326083..126327600-chr8:126340385..126341947,2	K562	blood:
3	chr8:126338417..126340973-chr8:126346730..126348300,2	K562	blood:
4	chr8:126288880..126291551-chr8:126340107..126343091,2	K562	blood:
5	chr8:126338417..126342692-chr8:126345063..126348300,5	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949614	chr8:126063646-126376699	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
2	nsv891436	chr8:126283766-126345076	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3410448	chr8:126339813-126418053	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126318600-126354600	Weak transcription	Ovary	ovary
2	chr8:126322000-126374200	Weak transcription	Aorta	Aorta
3	chr8:126324200-126354200	Weak transcription	Hela-S3	cervix
4	chr8:126329400-126344000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr8:126330800-126369200	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr8:126331200-126357400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr8:126331800-126340600	Weak transcription	K562	blood
8	chr8:126331800-126341400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr8:126332400-126345600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:126332600-126369400	Weak transcription	Fetal Stomach	stomach
11	chr8:126333000-126354200	Weak transcription	Fetal Lung	lung
12	chr8:126335600-126346000	Weak transcription	Fetal Intestine Small	intestine
13	chr8:126335600-126353200	Weak transcription	Primary B cells from cord blood	blood
14	chr8:126336600-126354200	Weak transcription	Spleen	Spleen
15	chr8:126339000-126342400	Weak transcription	Primary T cells from cord blood	blood
16	chr8:126339400-126340600	Weak transcription	Psoas Muscle	Psoas
17	chr8:126339400-126346200	Weak transcription	Thymus	Thymus
18	chr8:126340000-126341000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr8:126340000-126341600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr8:126340000-126341600	Enhancers	A549	lung
21	chr8:126340000-126341600	Enhancers	NHDF-Ad	bronchial
22	chr8:126340000-126341800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr8:126340000-126354200	Weak transcription	Esophagus	oesophagus
24	chr8:126340000-126359600	Weak transcription	Primary T cells fromperipheralblood	blood
25	chr8:126340200-126340800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr8:126340200-126341600	Enhancers	Muscle Satellite Cultured Cells	--
27	chr8:126340200-126341600	Enhancers	NH-A	brain
28	chr8:126340200-126341600	Enhancers	Osteobl	bone
29	chr8:126340200-126342000	Enhancers	HSMMtube	muscle
30	chr8:126340200-126342200	Enhancers	Fetal Heart	heart
31	chr8:126340400-126340800	Enhancers	Rectal Mucosa Donor 29	rectum
32	chr8:126340400-126341400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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