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Variant report
Variant
rs545129525
Chromosome Location
chr7:99414830-99414831
allele
A/C
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:99224377..99226344-chr7:99414554..99417105,2
K562
blood:
2
chr7:99414195..99416964-chr7:99417177..99419038,2
MCF-7
breast:
3
chr7:99412647..99414834-chr7:99418684..99423843,4
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000261511
Chromatin interaction
Extended variants information (count: 2 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv1827709
chr7:99353500-99440051
Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
10 gene(s)
inside rSNPs
diseases
2
nsv970418
chr7:99413271-99420442
Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer
TF binding regionChromatin interactive region
4 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links