Variant report

Variant	rs545208283
Chromosome Location	chr10:118766632-118766633
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr10:118766369-118767082	SK-N-SH	brain:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
2	ZNF217	chr10:118766527-118766963	MCF-7	breast:	n/a	n/a
3	CEBPB	chr10:118766520-118766978	A549	lung:	n/a	n/a
4	FOSL1	chr10:118766572-118766939	K562	blood:	n/a	chr10:118766748-118766759 chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
5	FOS	chr10:118766569-118766941	K562	blood:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766748-118766759 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
6	CEBPB	chr10:118766280-118766914	K562	blood:	n/a	n/a
7	TCF12	chr10:118766490-118766998	ECC-1	luminal epithelium:	n/a	n/a
8	REST	chr10:118766558-118766884	ECC-1	luminal epithelium:	n/a	n/a
9	EP300	chr10:118766579-118766898	SK-N-SH_RA	brain:	n/a	chr10:118766750-118766759 chr10:118766749-118766758
10	CEBPB	chr10:118766520-118766925	A549	lung:	n/a	n/a
11	JUND	chr10:118766393-118767085	SK-N-SH	brain:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
12	JUN	chr10:118766104-118766974	K562	blood:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
13	TEAD4	chr10:118766385-118766922	SK-N-SH	brain:	n/a	n/a
14	STAT3	chr10:118766619-118766876	MCF10A-Er-Src	breast:	n/a	chr10:118766749-118766758 chr10:118766750-118766759
15	JUND	chr10:118766606-118766885	H1-hESC	embryonic stem cell:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
16	JUN	chr10:118766272-118766979	Hela-S3	cervix:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
17	MAFF	chr10:118766223-118767132	K562	blood:	n/a	chr10:118766741-118766759
18	CEBPB	chr10:118766575-118766895	IMR90	lung:	n/a	n/a
19	FOSL2	chr10:118766481-118767089	MCF-7	breast:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
20	FOSL2	chr10:118766549-118766915	SK-N-SH	brain:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
21	RCOR1	chr10:118766631-118766944	K562	blood:	n/a	n/a
22	EP300	chr10:118766540-118766996	ECC-1	luminal epithelium:	n/a	chr10:118766750-118766759 chr10:118766749-118766758
23	SP1	chr10:118765991-118767161	HCT-116	colon:	n/a	n/a
24	FOSL2	chr10:118766628-118766863	HepG2	liver:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
25	EP300	chr10:118766546-118766926	SK-N-SH_RA	brain:	n/a	chr10:118766750-118766759 chr10:118766749-118766758
26	SP1	chr10:118765984-118767031	HCT-116	colon:	n/a	n/a
27	FOSL2	chr10:118766439-118767037	SK-N-SH	brain:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
28	MAFK	chr10:118766567-118766952	K562	blood:	n/a	chr10:118766748-118766758 chr10:118766748-118766757
29	CEBPB	chr10:118766449-118767008	HCT-116	colon:	n/a	n/a
30	HDAC2	chr10:118766498-118766894	MCF-7	breast:	n/a	n/a
31	JUND	chr10:118766545-118767104	MCF-7	breast:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
32	GATA3	chr10:118766421-118766865	MCF-7	breast:	n/a	chr10:118766761-118766770
33	JUN	chr10:118766591-118766929	HepG2	liver:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
34	ATF3	chr10:118766577-118766978	K562	blood:	n/a	n/a
35	CEBPB	chr10:118766570-118766916	A549	lung:	n/a	n/a
36	CEBPB	chr10:118766563-118766832	MCF-7	breast:	n/a	n/a
37	RFX5	chr10:118766608-118766910	K562	blood:	n/a	n/a
38	NFIC	chr10:118766357-118767172	SK-N-SH	brain:	n/a	n/a
39	JUND	chr10:118766566-118766972	HepG2	liver:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
40	NFE2	chr10:118766595-118766919	K562	blood:	n/a	chr10:118766748-118766758 chr10:118766749-118766759 chr10:118766743-118766758
41	JUN	chr10:118766582-118766956	K562	blood:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766758-118766770 chr10:118766750-118766759
42	IRF1	chr10:118766502-118766947	K562	blood:	n/a	chr10:118766750-118766759 chr10:118766830-118766844 chr10:118766749-118766758 chr10:118766760-118766769
43	YY1	chr10:118766559-118766916	SK-N-SH_RA	brain:	n/a	n/a
44	POLR2A	chr10:118766167-118766840	K562	blood:	n/a	n/a
45	EP300	chr10:118766456-118766950	Hela-S3	cervix:	n/a	chr10:118766750-118766759 chr10:118766749-118766758
46	JUN	chr10:118766081-118767108	K562	blood:	n/a	chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
47	FOSL1	chr10:118766016-118767292	HCT-116	colon:	n/a	chr10:118766748-118766759 chr10:118766750-118766758 chr10:118766759-118766769 chr10:118766760-118766768 chr10:118766749-118766759 chr10:118766748-118766760 chr10:118766761-118766772 chr10:118766751-118766758 chr10:118766749-118766758 chr10:118766480-118766487 chr10:118766758-118766770 chr10:118766750-118766759
48	CEBPB	chr10:118766609-118766918	K562	blood:	n/a	n/a
49	CEBPB	chr10:118766597-118766972	ECC-1	luminal epithelium:	n/a	n/a
50	PBX3	chr10:118766358-118767110	SK-N-SH	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:118763331..118765453-chr10:118765627..118768169,2	MCF-7	breast:
2	chr10:118765114..118768175-chr10:118770999..118774519,3	K562	blood:
3	chr10:118718724..118721628-chr10:118764683..118766816,3	MCF-7	breast:

Variant related genes	Relation type
KIAA1598	TF binding region
ENSG00000187164	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755506	chr10:118748764-118800107	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases
2	esv3525989	chr10:118764562-118770560	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	n/a
3	esv3525990	chr10:118765187-118770410	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a
4	esv3525991	chr10:118765187-118770410	Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a
5	esv11358	chr10:118766138-118768926	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv947704	chr10:118766293-118767918	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118765400-118766800	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr10:118765600-118766800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr10:118765600-118766800	Enhancers	HUVEC	blood vessel
4	chr10:118765600-118767000	Enhancers	Brain Substantia Nigra	brain
5	chr10:118765600-118767200	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr10:118765800-118766800	Enhancers	HepG2	liver
7	chr10:118766200-118766800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr10:118766200-118767200	Flanking Active TSS	A549	lung
9	chr10:118766400-118766800	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr10:118766600-118766800	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr10:118766600-118767200	Enhancers	K562	blood
12	chr10:118766600-118768200	Weak transcription	Brain Hippocampus Middle	brain

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