The 2.0 version of rSNPBase

Variant report

Variant rs545292297
Chromosome Location chr10:97208675-97208676
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97193400-97210800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr10:97200200-97208800 Enhancers Colon Smooth Muscle Colon
3 chr10:97202800-97209200 Enhancers Fetal Muscle Leg muscle
4 chr10:97203800-97209400 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr10:97204600-97208800 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr10:97204800-97209200 Enhancers Right Atrium heart
7 chr10:97204800-97209200 Enhancers Right Ventricle heart
8 chr10:97205200-97211000 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr10:97205600-97209000 Enhancers Skeletal Muscle Female skeletal muscle
10 chr10:97205600-97210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr10:97206000-97208800 Enhancers Skeletal Muscle Male skeletal muscle
12 chr10:97206000-97210800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr10:97206000-97210800 Weak transcription Brain Anterior Caudate brain
14 chr10:97206000-97210800 Weak transcription Fetal Brain Male brain
15 chr10:97206000-97217000 Weak transcription Gastric stomach
16 chr10:97206000-97220000 Enhancers Rectal Smooth Muscle rectum
17 chr10:97206200-97210800 Enhancers Fetal Heart heart
18 chr10:97206200-97219000 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr10:97206600-97211000 Weak transcription Fetal Intestine Large intestine
20 chr10:97206600-97211400 Weak transcription Fetal Intestine Small intestine
21 chr10:97206800-97208800 Enhancers Fetal Kidney kidney
22 chr10:97207200-97208800 Enhancers HepG2 liver
23 chr10:97207400-97208800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr10:97207600-97208800 Flanking Active TSS Stomach Smooth Muscle stomach
25 chr10:97207800-97209000 Weak transcription Colonic Mucosa Colon
26 chr10:97208000-97208800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr10:97208000-97210800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr10:97208000-97210800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr10:97208000-97211000 Weak transcription Brain Germinal Matrix brain
30 chr10:97208000-97216000 Weak transcription Brain Cingulate Gyrus brain
31 chr10:97208200-97208800 Enhancers H1 Cell Line embryonic stem cell
32 chr10:97208200-97208800 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr10:97208200-97208800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr10:97208200-97208800 Enhancers HMEC breast
35 chr10:97208200-97210000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr10:97208200-97210800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr10:97208200-97210800 Weak transcription Fetal Lung lung
38 chr10:97208200-97216200 Weak transcription Lung lung
39 chr10:97208200-97219000 Weak transcription Ovary ovary
40 chr10:97208200-97219000 Weak transcription HSMMtube muscle
41 chr10:97208400-97210200 Weak transcription Aorta Aorta
42 chr10:97208400-97210200 Weak transcription Psoas Muscle Psoas
43 chr10:97208400-97210800 Weak transcription Liver Liver
44 chr10:97208400-97210800 Weak transcription Fetal Brain Female brain
45 chr10:97208400-97211000 Weak transcription Brain Angular Gyrus brain
46 chr10:97208400-97211200 Weak transcription Brain Substantia Nigra brain
47 chr10:97208600-97208800 Enhancers HUES6 Cell Line embryonic stem cell
48 chr10:97208600-97209000 Weak transcription Fetal Muscle Trunk muscle
49 chr10:97208600-97209000 Weak transcription Left Ventricle heart
50 chr10:97208600-97210000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015