Variant report

Variant	rs545340685
Chromosome Location	chr8:104014112-104014113
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	esv3496086	chr8:104014069-104014645	ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	diseases
3	esv3496084	chr8:104014081-104014609	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases
4	esv3496087	chr8:104014106-104014681	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104007200-104014400	Weak transcription	Primary B cells from peripheral blood	blood
2	chr8:104007600-104014200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:104011800-104014200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr8:104012800-104014200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr8:104012800-104014600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr8:104013000-104014200	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr8:104013000-104014400	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr8:104013400-104017400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr8:104013600-104015000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
10	chr8:104014000-104014200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr8:104014000-104014200	Flanking Active TSS	HepG2	liver
12	chr8:104014000-104015200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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