Variant report

Variant	rs545545813
Chromosome Location	chr5:108601223-108601224
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027163	chr5:108445447-108839913	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv599338	chr5:108528729-108675737	Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv4955	chr5:108577946-108611852	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv508375	chr5:108587628-108624046	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3517121	chr5:108594424-108601961	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv2602056	chr5:108594448-108601760	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	nsv513255	chr5:108594592-108601231	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3439877	chr5:108594650-108601488	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv6506	chr5:108594801-108601334	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv2305572	chr5:108594898-108601324	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3469702	chr5:108594955-108601229	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3517119	chr5:108594981-108601235	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:108586000-108606000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:108594200-108601600	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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