Variant report

Variant	rs545565938
Chromosome Location	chr7:137501782-137501783
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:137496086..137497975-chr7:137500042..137502179,2	K562	blood:
2	chr7:137501152..137502055-chr7:137578227..137578771,2	MCF-7	breast:
3	chr7:137501259..137502057-chr7:137583587..137584474,3	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv831150	chr7:137500559-137652808	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137486000-137501800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:137486600-137501800	Weak transcription	HSMMtube	muscle
3	chr7:137490200-137504600	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr7:137490200-137505200	Weak transcription	NH-A	brain
5	chr7:137490400-137505200	Weak transcription	HSMM	muscle
6	chr7:137494000-137505600	Weak transcription	Aorta	Aorta
7	chr7:137494400-137504400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr7:137498200-137504400	Weak transcription	Fetal Brain Female	brain
9	chr7:137499400-137504400	Weak transcription	Fetal Brain Male	brain
10	chr7:137499800-137501800	Weak transcription	Brain Cingulate Gyrus	brain
11	chr7:137500800-137503200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr7:137501000-137501800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr7:137501000-137503400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr7:137501000-137503800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr7:137501200-137503400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr7:137501400-137501800	Enhancers	Brain Angular Gyrus	brain
17	chr7:137501400-137502000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr7:137501400-137502000	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr7:137501600-137501800	Enhancers	Brain Anterior Caudate	brain
20	chr7:137501600-137502000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr7:137501600-137502000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr7:137501600-137502000	Enhancers	HepG2	liver
23	chr7:137501600-137502200	Enhancers	NHLF	lung
24	chr7:137501600-137503200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr7:137501600-137504200	Enhancers	Osteobl	bone

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