The 2.0 version of rSNPBase

Variant report

Variant rs545572978
Chromosome Location chr9:73226820-73226821
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:73206600-73227800 Weak transcription Aorta Aorta
2 chr9:73215800-73236800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr9:73216000-73227600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr9:73217000-73230200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr9:73217400-73231200 Weak transcription Fetal Brain Female brain
6 chr9:73217400-73233400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr9:73217400-73242400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr9:73217600-73236400 Weak transcription Fetal Kidney kidney
9 chr9:73217800-73228600 Weak transcription Brain Anterior Caudate brain
10 chr9:73218000-73228400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr9:73218000-73229800 Weak transcription Fetal Brain Male brain
12 chr9:73219800-73228000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr9:73220400-73227600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr9:73223400-73228400 Weak transcription Left Ventricle heart
15 chr9:73223600-73230000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr9:73224600-73229400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr9:73224800-73227800 Weak transcription Fetal Lung lung
18 chr9:73224800-73229400 Weak transcription Brain Angular Gyrus brain
19 chr9:73224800-73241600 Weak transcription Ovary ovary
20 chr9:73225000-73228800 Weak transcription Adipose Nuclei Adipose
21 chr9:73225000-73228800 Weak transcription Colon Smooth Muscle Colon
22 chr9:73225200-73227800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr9:73225200-73227800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr9:73225200-73227800 Weak transcription Right Atrium heart
25 chr9:73225200-73227800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr9:73225200-73227800 Weak transcription HSMMtube muscle
27 chr9:73225200-73228000 Weak transcription NHLF lung
28 chr9:73225200-73228400 Weak transcription Fetal Heart heart
29 chr9:73225200-73228600 Weak transcription Brain Hippocampus Middle brain
30 chr9:73225200-73229600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr9:73225200-73229800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr9:73225200-73229800 Weak transcription HSMM muscle
33 chr9:73225200-73230000 Weak transcription Right Ventricle heart
34 chr9:73225400-73227600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr9:73225400-73228800 Weak transcription Brain Substantia Nigra brain
36 chr9:73225400-73229600 Weak transcription Brain Cingulate Gyrus brain
37 chr9:73225600-73227800 Weak transcription Psoas Muscle Psoas
38 chr9:73225600-73228400 Weak transcription Fetal Muscle Leg muscle
39 chr9:73225600-73230200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr9:73226000-73227800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr9:73226400-73228200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr9:73226800-73227800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr9:73226800-73229200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015