Variant report

Variant	rs545610030
Chromosome Location	chr4:81508832-81508833
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv9744	chr4:81508721-81509954	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81502200-81509000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr4:81508000-81509000	Enhancers	Fetal Kidney	kidney
3	chr4:81508400-81509600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr4:81508600-81509400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr4:81508800-81509000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr4:81508800-81509000	Enhancers	HMEC	breast
7	chr4:81508800-81509200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:81508800-81509200	Enhancers	Primary hematopoietic stem cells	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links