Variant report

Variant rs545635060
Chromosome Location chr2:11052701-11052702
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11051200-11052800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
2 chr2:11051200-11054000 Bivalent/Poised TSS Brain Anterior Caudate brain
3 chr2:11051200-11054600 Bivalent Enhancer Placenta Placenta
4 chr2:11051400-11052800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr2:11051400-11052800 Bivalent/Poised TSS Fetal Brain Female brain
6 chr2:11051400-11053000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
7 chr2:11051400-11053000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
8 chr2:11051400-11053000 Bivalent Enhancer Fetal Lung lung
9 chr2:11051600-11052800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr2:11051600-11052800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
11 chr2:11051600-11052800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:11051600-11052800 Bivalent/Poised TSS Fetal Kidney kidney
13 chr2:11051600-11052800 Bivalent/Poised TSS Rectal Smooth Muscle rectum
14 chr2:11051600-11052800 Bivalent/Poised TSS HSMM muscle
15 chr2:11051600-11052800 Bivalent/Poised TSS NH-A brain
16 chr2:11051600-11053000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
17 chr2:11051600-11053000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
18 chr2:11051600-11053600 Bivalent Enhancer Fetal Brain Male brain
19 chr2:11051600-11054600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
20 chr2:11051600-11056200 Active TSS Brain Angular Gyrus brain
21 chr2:11051800-11052800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:11051800-11052800 Bivalent/Poised TSS Duodenum Mucosa Duodenum
23 chr2:11051800-11052800 Active TSS Right Atrium heart
24 chr2:11051800-11052800 Bivalent/Poised TSS HSMMtube muscle
25 chr2:11051800-11052800 Bivalent/Poised TSS NHLF lung
26 chr2:11051800-11053000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
27 chr2:11051800-11053000 Bivalent/Poised TSS Colon Smooth Muscle Colon
28 chr2:11051800-11053000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
29 chr2:11051800-11053000 Active TSS Pancreatic Islets Pancreatic Islet
30 chr2:11051800-11053600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr2:11052000-11052800 Active TSS Brain Inferior Temporal Lobe brain
32 chr2:11052000-11052800 Active TSS A549 lung
33 chr2:11052000-11053000 Enhancers Primary T helper cells fromperipheralblood blood
34 chr2:11052000-11053000 Bivalent Enhancer Esophagus oesophagus
35 chr2:11052000-11053000 Bivalent/Poised TSS Fetal Intestine Large intestine
36 chr2:11052000-11053800 Bivalent/Poised TSS Brain Hippocampus Middle brain
37 chr2:11052000-11053800 Enhancers Gastric stomach
38 chr2:11052000-11054200 Bivalent/Poised TSS Brain Germinal Matrix brain
39 chr2:11052200-11052800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr2:11052200-11052800 Bivalent Enhancer Primary hematopoietic stem cells blood
41 chr2:11052200-11052800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:11052200-11052800 Bivalent Enhancer Adipose Nuclei Adipose
43 chr2:11052200-11052800 Bivalent/Poised TSS Colonic Mucosa Colon
44 chr2:11052200-11052800 Bivalent/Poised TSS Stomach Smooth Muscle stomach
45 chr2:11052200-11053200 Bivalent/Poised TSS H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr2:11052200-11053600 Enhancers Pancreas Pancrea
47 chr2:11052200-11054600 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:11052400-11052800 Flanking Active TSS Ovary ovary
49 chr2:11052400-11054200 Bivalent Enhancer Spleen Spleen
50 chr2:11052600-11052800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell

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