Variant report

Variant	rs545676504
Chromosome Location	chr5:94618821-94618822
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3341897	chr5:94618421-94620969	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94616200-94619000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr5:94616800-94619000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr5:94617400-94619000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr5:94618200-94619000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr5:94618400-94620000	Enhancers	Fetal Brain Male	brain
6	chr5:94618400-94621200	Active TSS	Brain Inferior Temporal Lobe	brain
7	chr5:94618600-94621600	Active TSS	Brain Angular Gyrus	brain
8	chr5:94618800-94619000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr5:94618800-94619000	Flanking Active TSS	ES-WA7 Cell Line	embryonic stem cell
10	chr5:94618800-94619000	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
11	chr5:94618800-94619000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
12	chr5:94618800-94619000	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr5:94618800-94619000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr5:94618800-94619000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:94618800-94619000	Bivalent/Poised TSS	Fetal Brain Female	brain
16	chr5:94618800-94619000	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
17	chr5:94618800-94619000	Bivalent Enhancer	HUVEC	blood vessel
18	chr5:94618800-94619200	Flanking Active TSS	H1 Cell Line	embryonic stem cell
19	chr5:94618800-94619200	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
20	chr5:94618800-94619200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
21	chr5:94618800-94619200	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
22	chr5:94618800-94619200	Bivalent Enhancer	Brain Germinal Matrix	brain
23	chr5:94618800-94619400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
24	chr5:94618800-94619600	Active TSS	Right Ventricle	heart
25	chr5:94618800-94620600	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
26	chr5:94618800-94620600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
27	chr5:94618800-94620800	Active TSS	H9 Cell Line	embryonic stem cell
28	chr5:94618800-94620800	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr5:94618800-94620800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum

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